Publications related to A Forward Regridding Method with Minimal Oversampling for Accurate and Efficient Iterative Tomographic Algorithms

Optical projection tomography for whole organ imaging

In the past twenty years, far-reaching studies of molecular and cellular processes have reached a milestone in their maturation, and the knowledge from these studies was ready to apply at higher organizational levels. At that time, rodent models were long ...

EPFL2019

Multi-channel Time Encoding for Improved Reconstruction of Bandlimited Signals

Martin Vetterli, Adam James Scholefield, Karen Adam

Traditional sampling involves encoding a signal through (time, value)-pairs. In contrast, time encoding machines (TEMs) characterize a signal by recording time points which depend on the integral of the signal over time. We study multi-channel TEMs where c ...

2019

Data-driven Measurement Designs for Magnetic Resonance Imaging

Baran Gözcü

Despite being a powerful medical imaging technique which does not emit any ionizing radiation, magnetic resonance imaging (MRI) always had the major problem of long scanning times that can take up to an hour depending on the application. It also requires u ...

EPFL2019

3D Bpconvnet To Reconstruct Parallel Mri

Michaël Unser, Kyong Hwan Jin

In recent years, compressed sensing techniques have been applied to the reconstruction of parallel magnetic resonance (MR) images. Particularly for 3D MR signal, it is crucial to acquire fewer samples to reduce the distortions caused by long-time acquisiti ...

IEEE2018

Autonomous illumination control for localization microscopy

Suliana Manley, Kyle Michael Douglass, Baptiste Romain Samuel Ottino, Marcel Stefko

Super-resolution fluorescence microscopy improves spatial resolution, but this comes at a loss of image throughput and presents unique challenges in identifying optimal acquisition parameters. Microscope automation routines can offset these drawbacks, but ...

OPTICAL SOC AMER2018

Learning-Based Compressive MRI

Volkan Cevher, Jonathan Mark Scarlett, Yen-Huan Li, Baran Gözcü, Rabeeh Karimi Mahabadi

In the area of magnetic resonance imaging (MRI), an extensive range of non-linear reconstruction algorithms have been proposed that can be used with general Fourier subsampling patterns. However, the design of these subsampling patterns has typically been ...

Institute of Electrical and Electronics Engineers2018

Efficient Inversion of Multiple-Scattering Model for Optical Diffraction Tomography

Michaël Unser, Thanh-An Michel Pham, Emmanuel Emilien Louis Soubies

Optical diffraction tomography relies on solving an inverse scattering problem governed by the wave equation. Classical reconstruction algorithms are based on linear approximations of the forward model (Born or Rytov), which limits their applicability to t ...

2017

LEAP: Looking beyond pixels with continuous-space EstimAtion of Point sources

Martin Vetterli, Paul Hurley, Thierry Blu, Matthieu Martin Jean-André Simeoni, Hanjie Pan

Context. Two main classes of imaging algorithms have emerged in radio interferometry: the CLEAN algorithm and its multiple variants, and compressed-sensing inspired methods. They are both discrete in nature, and estimate source locations and intensities on ...

2017

Sparsity-Based Data Reconstruction Models for Biomedical Imaging

Emrah Bostan

We propose new regularization models to solve inverse problems encountered in biomedical imaging applications. In formulating mathematical schemes, we base our approach on the sparse signal processing principles that have emerged as a central paradigm in t ...

EPFL2016

Sparse regularization methods in ultrafast ultrasound imaging

Jean-Philippe Thiran, Yves Wiaux, Rafael Eduardo Carrillo Rangel, Adrien Georges Jean Besson, Olivier Bernard

Ultrafast ultrasound (US) imaging based on plane wave (PW) insonification is a widely used modality nowadays. Two main types of approaches have been proposed for image reconstruction either based on classical delay-and-sum (DAS) or on Fourier reconstructio ...

Ieee2016