A Query Model to Capture Event Pattern Matching in RDF Stream Processing Query Languages

Publications associées (27)

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Graph Chatbot

An Interactive Gameplay to Crowdsource Multiple Sequence Alignment of Genome Sequences: Genenigma

Kalpani Anuradha Welivita

Comparative genomics is a field of research that compares genomes of different organisms to identify common patterns. It is a powerful method used to identify the genetic diseases that cause mutations. Multiple Sequence Alignment (MSA) is an intermediate s ...

ASSOC COMPUTING MACHINERY2019

On the relevance of quality score metadata in genomic sequence data for omics applications

Ana Angelica Hernandez Lopez

High-throughput sequencing of DNA molecules has revolutionized biomedical research by enabling the quantitative analysis of the genome to study its function, structure and dynamics. It is driving sequencing-based experiments in life sciences as evidenced b ...

EPFL2019

IMPACT: Interval-based Multi-pass Proteomic Alignment with Constant Traceback

James Richard Larus, Sahand Kashani, Stuart Anthony Byma

Darwin is a genomics co-processor that achieved a 15000x acceleration on long read assembly through innovative hardware and algorithm co-design. Darwins algorithms and hardware implementation were specifically designed for DNA analysis pipelines. This pape ...

2019

Interactive Visual Exploration of Spatio-Temporal Urban Data Sets using Urbane

Anastasia Ailamaki, Eleni Tzirita Zacharatou, Haoqiong Bian

The recent explosion in the number and size of spatio-temporal data sets from urban environments and social sensors creates new opportunities for data-driven approaches to understand and improve cities. Visual analytics systems like Urbane aim to empower d ...

2018

Building a Question-Answering Chatbot using Forum Data in the Semantic Space

Pierre Dillenbourg, Marc Laperrouza, Khalil Mrini

We build a conversational agent which knowledge base is an online forum for parents of autistic children. We collect about 35,000 threads totalling some 600,000 replies, and label 1% of them for usefulness using Amazon Mechanical Turk. We train a Random Fo ...

2018

Compilation Techniques for Incremental Collection Processing

Daniel Lupei

Many map-reduce frameworks as well as NoSQL systems rely on collection programming as their interface of choice due to its rich semantics along with an easily parallelizable set of primitives. Unfortunately, the potential of collection programming is not ...

EPFL2017

Distributed Time Series Analytics

Tian Guo

In recent years time series data has become ubiquitous thanks to affordable sensors and advances in embedded technology. Large amount of time-series data are continuously produced in a wide spectrum of applications, such as sensor networks, medical monitor ...

EPFL2017

High level synthesis of Smith-Waterman dataflow implementations

Marco Mattavelli, Simone Casale Brunet, Endri Bezati

The paper presents the results of design explorations for the implementation of the Smith-Waterman (S-W) algorithm executing DNA and protein sequences alignment. Both design explorations studies and the corresponding FPGA implementations are obtained by wr ...

2017

Semantic representation and processing of hypoglycemic events derived from wearable sensor data

Karl Aberer, Jean Paul Calbimonte Perez, Jean-Eudes Marie Ranvier

Diabetes Type 1 is a metabolic disease which results in a lack of insulin production, causing high glucose levels in the blood. It is crucial for diabetic patients to balance this glucose level, and they depend on external substances to do so. In order to ...

Ios Press2017

Combine and conquer: Relating BIP and Reo

Simon Bliudze

Coordination languages simplify design and development of concurrent systems. Particularly, exogenous coordination languages, like BIP and Reo, enable system designers to express the interactions among components in a system explicitly. A formal relation b ...

Elsevier Science Inc2017

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