Graph Alignment: Wasserstein-based

Description

This lecture covers the challenges in comparing non-Euclidean data such as social, functional, and economic networks, emphasizing the importance of topology. The instructor proposes a solution using Laplacian matrices for graph alignment, discussing the limitations of existing methods. The lecture explores optimal transport for graph distance computation, graph signal prediction, and the GOT algorithm for graph alignment optimization. It delves into the optimization difficulties and stochastic exploration techniques, concluding with experiments on graph classification and the significance of optimal transport in capturing structural information and transferring signals between graphs.

Official source

https://mediaspace.epfl.ch/media/0_hll7ov0b

About this result

This page is automatically generated and may contain information that is not correct, complete, up-to-date, or relevant to your search query. The same applies to every other page on this website. Please make sure to verify the information with EPFL's official sources.

Related lectures (147)

Related concepts (47)

Graph database

A graph database (GDB) is a database that uses graph structures for semantic queries with nodes, edges, and properties to represent and store data. A key concept of the system is the graph (or edge or relationship). The graph relates the data items in the store to a collection of nodes and edges, the edges representing the relationships between the nodes. The relationships allow data in the store to be linked together directly and, in many cases, retrieved with one operation.

Final topology

In general topology and related areas of mathematics, the final topology (or coinduced, strong, colimit, or inductive topology) on a set with respect to a family of functions from topological spaces into is the finest topology on that makes all those functions continuous. The quotient topology on a quotient space is a final topology, with respect to a single surjective function, namely the quotient map. The disjoint union topology is the final topology with respect to the inclusion maps.

Order topology

In mathematics, an order topology is a certain topology that can be defined on any totally ordered set. It is a natural generalization of the topology of the real numbers to arbitrary totally ordered sets. If X is a totally ordered set, the order topology on X is generated by the subbase of "open rays" for all a, b in X. Provided X has at least two elements, this is equivalent to saying that the open intervals together with the above rays form a base for the order topology.

Graph automorphism

In the mathematical field of graph theory, an automorphism of a graph is a form of symmetry in which the graph is mapped onto itself while preserving the edge–vertex connectivity. Formally, an automorphism of a graph G = (V, E) is a permutation σ of the vertex set V, such that the pair of vertices (u, v) form an edge if and only if the pair (σ(u), σ(v)) also form an edge. That is, it is a graph isomorphism from G to itself. Automorphisms may be defined in this way both for directed graphs and for undirected graphs.

Structural alignment

Structural alignment attempts to establish homology between two or more polymer structures based on their shape and three-dimensional conformation. This process is usually applied to protein tertiary structures but can also be used for large RNA molecules. In contrast to simple structural superposition, where at least some equivalent residues of the two structures are known, structural alignment requires no a priori knowledge of equivalent positions.