Force spectroscopy

Force spectroscopy is a set of techniques for the study of the interactions and the binding forces between individual molecules. These methods can be used to measure the mechanical properties of single polymer molecules or proteins, or individual chemical bonds. The name "force spectroscopy", although widely used in the scientific community, is somewhat misleading, because there is no true matter-radiation interaction. Techniques that can be used to perform force spectroscopy include atomic force microscopy, optical tweezers, magnetic tweezers, acoustic force spectroscopy, microneedles, and biomembranes. Force spectroscopy measures the behavior of a molecule under stretching or torsional mechanical force. In this way a great deal has been learned in recent years about the mechanochemical coupling in the enzymes responsible for muscle contraction, transport in the cell, energy generation (F1-ATPase), DNA replication and transcription (polymerases), DNA

Quasistatic and dynamic force microscopy of single antigen-antibody complexes and fibrin-fibrinogen systems

The molecular processes based on the specific receptor-ligand interactions (e.g. immune response to a foreign antigen, communication between nerve cells, etc.) are essential for a good and stable performance of living organisms. The aim of the present work is to study such molecular processes with the Atomic Force Microscope (AFM) operated in Force Spectroscopy (FS) mode. Information such as the force and length of the ligand-receptor bond rupture could be obtained from the standard quasistatic FS studies, whereas no external dithering applied to the AFM tips. Firstly, the antigen-antibody interactions were examined with the Bovine Serum Albumin (BSA) protein and its poly- and two different monoclonal antibodies. It was shown that the peak unbinding force depends on the type of antibody and the antibody concentration. The single potential barrier is dominant for the interaction between BSA and monoclonal antibodies and was revealed from the loading rate-dependent measurements. Secondly, we are interested in the process of fibrin gel formation, in particular in the forces involved in this process. It was demonstrated that the fibrin-fibrinogen interaction is the specific one. The unbinding force rupture for single fibrin-fibrin(ogen) complex was determined to be of about 320 pN at a loading rate of 3.5 nN/s. The single potential barrier is also dominant for this interaction. Moreover, a new method of direct and continuous measurement of the spring constant of single molecules or molecular complexes has been elaborated in our laboratory. To this end, the standard FS technique with functionalized tips and samples is combined with a small dithering of the AFM tip. The change of the dithering amplitude as a function of the pulling force is measured in order to extract the spring constant of the complex. The potentialities of this technique were demonstrated for the experiments with single BSA – polyclonal antibody to BSA (Ab-BSA) and fibrinogen – fibrinogen complexes.

EPFL2004

Covalent attachment of proteins to calcite surface for the single molecule experiments

Two protocols of covalent attachment of proteins onto the calcite surface, viz. one using the metallochelat and second using the aminohexil, are elaborated. Single molecule force spectroscopy method has been used to test their efficiency and practical applicability. Experiments were performed measuring the specific interaction force between bovine serum albumin (BSA) fixed onto the freshly cleaved calcite single crystal surface (procedure under the study here) and its polyclonal antibody (Ab-BSA) immobilized onto an AFM tip using standard and well studied procedure. We found the conditions, when up to 3-3.5% of tip-sample approaches lead to the formation of a single specific bond. (C) 2007 Elsevier B.V. All rights reserved.

2008

Quasistatic and dynamic force microscopy of single antigen-antibody complexes and fibrin-fibrinogen systems

EPFL2004

Quasistatic and dynamic force microscopy of single antigen-antibody complexes and fibrin-fibrinogen systems

Covalent attachment of proteins to calcite surface for the single molecule experiments

Actuated MEMS and NEMS for cell force spectroscopy and gas sensing applications

Actuated MEMS and NEMS for cell force spectroscopy and gas sensing applications

Quasistatic and dynamic force microscopy of single antigen-antibody complexes and fibrin-fibrinogen systems

Covalent attachment of proteins to calcite surface for the single molecule experiments