Concept

Data curation

Related publications (29)

Rethinking data browsing through embodied knowledge

In the age of digital and big data, the interaction with machines is central and emphasizes the sophistication of user interfaces and browsing tools. However, in the domain of digital artwork collections, most platforms propose access to images through key ...

2021

Materials Cloud, a platform for open computational science

Berend Smit, Nicola Marzari, Giovanni Pizzi, Martin Uhrin, Fernando Gargiulo, Christoph Leopold Talirz, Aliaksandr Yakutovich, Sebastiaan Philippe Huber, Snehal Pramod Kumbhar, Spyros Zoupanos, Elsa Passaro, Daniele Passerone

Materials Cloud is a platform designed to enable open and seamless sharing of resources for computational science, driven by applications in materials modelling. It hosts (1) archival and dissemination services for raw and curated data, together with their ...

2020

Designing Singlet Fission Candidates from Donor-Acceptor Copolymers

Sergio Vela Llausi, Maria Fumanal Quintana, Jacob Terence Blaskovits

Singlet fission (SF) has demonstrated significant promise for boosting the power conversion efficiency (PCE) of solar cells. Traditionally, SF is targeted as an intermolecular process; however, its dependence on crystal packing makes molecular design diffi ...

AMER CHEMICAL SOC2020

War of Words: The Competitive Dynamics of Legislative Processes

Patrick Thiran, Matthias Grossglauser, Victor Kristof

A body of law is an example of a dynamic corpus of text documents that are jointly maintained by a group of editors who compete and collaborate in complex constellations. Our goal is to develop predictive models for this process, thereby shedding light on ...

ACM / IW3C2 (International World Wide Web Conference Committee)2020

A Text Mining Pipeline Using Active and Deep Learning Aimed at Curating Information in Computational Neuroscience

Christian O'Reilly, Elisabetta Iavarone

The curation of neuroscience entities is crucial to ongoing efforts in neuroinformatics and computational neuroscience, such as those being deployed in the context of continuing large-scale brain modelling projects. However, manually sifting through thousa ...

Springer2019

In silico tracing of the fate of single carbon atoms in different physiological states of E. coli

Jasmin Maria Hafner, Noushin Hadadi, Beatriz Lopes Pinto Basto Carreira

Many applications of systems biology such as the simulation of isotope labeling experiments and pathway inference in metabolic engineering rely on atom-level representation of metabolism. Because of its challenging complexity and the difficulty of obtainin ...

2018

Recommender Systems for Healthy Behavior Change

Onur Yürüten

Sedentary lifestyles and bad eating habits influence the onset of many serious health problems. Healthy behavior change is an arduous task, and requires a careful planning. In this thesis, we propose that behavior recommenders can help their users achieve ...

EPFL2017

A Framework for Collaborative Curation of Neuroscientific Literature

Sean Lewis Hill, Christian O'Reilly, Elisabetta Iavarone

Large models of complex neuronal circuits require specifying numerous parameters, with values that often need to be extracted from the literature, a tedious and error-prone process. To help establishing shareable curated corpora of annotations, we have dev ...

Frontiers Research Foundation2017

Exploring chemodiversity in metabolism towards the selective integration of chemistry into biology

Vassily Hatzimanikatis, Jasmin Maria Hafner, Noushin Hadadi

The availability of different levels of omics data helps us to observe cells with higher resolution and from different perspectives. Consequently, the computational exploration of metabolism gained more importance in the last decade to make sense of newly ...

2017

Design of novel enzyme-catalyzed reactions linked to protein sequences for finding enzyme engineering targets

Vassily Hatzimanikatis, Jasmin Maria Hafner, Homa Mohammadi Peyhani, Noushin Hadadi

A key challenge in metabolic engineering is to find and to improve biosynthetic pathways that lead to the cellular production of a given industrial, pharmaceutical or specialty chemical compound. In many cases, the enzymatic reactions required for bio-prod ...

2017

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