Glomalin is a glycoprotein produced abundantly on hyphae and spores of arbuscular mycorrhizal (AM) fungi in soil and in roots. Glomalin was discovered in 1996 by Sara F. Wright, a scientist at the USDA Agricultural Research Service. The name comes from Glomerales, an order of fungi. Most AM fungi are of the division Glomeromycota. An elusive substance, it is mostly known from its glue-like effect on soil and has not yet been isolated.
The specific protein glomalin has not yet been isolated and described. What has been described is an extraction process involving heat and citrate, producing a mixture containing a substance that is reactive to a monoclonal antibody Mab32B11 raised against crushed AM fungi spores. The substance is then provisionally named "glomalin". As many laboratories do not have the equipment to perform an antibody-based isolation (ELISA), a crude mixture called glomalin-related soil proteins (GRSP) is used to refer to the extract portion reactive to the Bradford protein assay. There is significant confusion between the ideal glomalin protein, the antibody-reactive extract portion termed "glomalin", and GRSP.
"Glomalin" was first identified by the Mab32B11 assay in 1987. It eluded extraction until 1996 because, according to its discoverer Sarah F. Wright, "It requires an unusual effort to dislodge glomalin for study: a bath in citrate combined with heating at 250 °F (121 °C) for at least an hour.... No other soil glue found to date required anything as drastic as this." However, using advanced analytical methods in 2010, the citrate-heating extraction procedure for GRSP was proven to co-extract humic substances, so it is still not clear if this "glue effect" comes from glomalin or the other substances that are co-extracted using that method.
Based on her extraction, Wright thinks the "glomalin molecule is a clump of small glycoproteins with iron and other ions attached... glomalin contains from 1 to 9% tightly bound iron.... We've seen glomalin on the outside of hyphae, and we believe this is how the hyphae seal themselves so they can carry water and nutrients.
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Explores organic matter transformation in soil, including humification and decomposition processes.
Soil biology is the study of microbial and faunal activity and ecology in soil. Soil life, soil biota, soil fauna, or edaphon is a collective term that encompasses all organisms that spend a significant portion of their life cycle within a soil profile, or at the soil-litter interface. These organisms include earthworms, nematodes, protozoa, fungi, bacteria, different arthropods, as well as some reptiles (such as snakes), and species of burrowing mammals like gophers, moles and prairie dogs.
A fungus (: fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from the other eukaryotic kingdoms, which, by one traditional classification, includes Plantae, Animalia, Protozoa, and Chromista. A characteristic that places fungi in a different kingdom from plants, bacteria, and some protists is chitin in their cell walls.
In classical soil science, humus is the dark organic matter in soil that is formed by the decomposition of plant and animal matter. It is a kind of soil organic matter. It is rich in nutrients and retains moisture in the soil. Humus is the Latin word for "earth" or "ground". In agriculture, "humus" sometimes also is used to describe mature or natural compost extracted from a woodland or other spontaneous source for use as a soil conditioner. It is also used to describe a topsoil horizon that contains organic matter (humus type, humus form, or humus profile).
Electron transfer reactions are central to the transformation of energy in the environment and play an important role in biogeochemical element cycling. In soils, one of the main drivers of carbon cycling is the activity of organisms that utilize the energ ...
The present study investigates the changes in dissolved organic matter (DOM) composition and its influences on trace metal dispersion from the Shuya River (SR) in the Petrozavodsk Bay of Lake Onega during ice covered and ice-free periods. Humic substances ...
In this work, we performed electrochemical investigations of Fe-binding ligands in water samples collected in autumn 2011 along the Australian GEOTRACES southwestern Pacific section (GP13, between 153 degrees E and 170 degrees W longitude along the 30 degr ...