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Cladogram

Related publications (14)

A mitochondria-specific mutational signature of aging: increased rate of A > G substitutions on the heavy strand

Jacques Fellay, Konstantin Popadin, Dmitrii Iliushchenko, Stepan Denisov

The mutational spectrum of the mitochondrial DNA (mtDNA) does not resemble any of the known mutational signatures of the nuclear genome and variation in mtDNA mutational spectra between different organisms is still incomprehensible. Since mitochondria are ...

OXFORD UNIV PRESS2022

Phylogenetic estimation of the viral fitness landscape of HIV-1 set-point viral load

Jacques Fellay, Luca Ferretti

Set-point viral load (SPVL), a common measure of human immunodeficiency virus (HIV)-1 virulence, is partially determined by viral genotype. Epidemiological evidence suggests that this viral property has been under stabilising selection, with a typical opti ...

OXFORD UNIV PRESS2022

A Maximum-Likelihood-based Multi-User LoRa Receiver Implemented in GNU Radio

Andreas Peter Burg, Alexios Konstantinos Balatsoukas Stimming, Orion Afisiadis, Joachim Tobias Tapparel, Mathieu Pierre Xhonneux

LoRa is a popular low-power wide-area network (LPWAN) technology that uses spread-spectrum to achieve long-range connectivity and resilience to noise and interference. For energy efficiency reasons, LoRa adopts a pure ALOHA access scheme, which leads to re ...

IEEE2020

Phylogenetic correlations can suffice to infer protein partners from sequences

Anne-Florence Raphaëlle Bitbol

Author summary Many biologically important protein-protein interactions are conserved over evolutionary time scales. This leads to two different signals that can be used to computationally predict interactions between protein families and to identify speci ...

2019

Neuronal morphologies: the shapes of thoughts

Lida Kanari

The mammalian brain, one of the most fascinating systems in nature, is a complex biological structure that has kept scientists busy for over a century. Many of the brain's mysteries have been unraveled due to the enormous efforts of the scientific communit ...

EPFL2018

Automated Reconstruction of Evolving Curvilinear Tree Structures

Przemyslaw Rafal Glowacki

Curvilinear networks are prevalent in nature and span many different scales, ranging from micron-scale neural structures in the brain to petameter-scale dark-matter arbors binding massive galaxy clusters. Reliably reconstructing them in an automated fashio ...

EPFL2016

Inferring the Evolutionary History of Primate microRNA Binding Sites: Overcoming Motif Counting Biases

Jeffrey David Jensen, Feng Gao

The first microRNAs (miRNAs) were identified as essential, conserved regulators of gene expression, targeting the same genes across nearly all bilaterians. However, there are also prominent examples of conserved miRNAs whose functions appear to have shifte ...

Oxford Univ Press2014

Contrasted taxonomic, phylogenetic and functional diversity patterns in semi-natural permanent grasslands along an altitudinal gradient

François Gillet

Background and aims - Recent methodological and theoretical advances in community ecology have allowed more robust exploration of complementary facets of biodiversity in plant communities. Focusing on semi-natural permanent grasslands of the French Jura Mo ...

Soc Royal Botan Belgique2014

Contrasted taxonomic, phylogenetic and functional diversity patterns in semi-natural permanent grasslands along an altitudinal gradient

National Botanic Garden of Belgium and Royal Botanical Society of Belgium2014

COI Barcoding of Nebelid Testate Amoebae (Amoebozoa: Arcellinida): Extensive Cryptic Diversity and Redefinition of the Hyalospheniidae Schultze

Edward Mitchell, Enrique Lara, Thierry Jean Heger

We used Cytochrome Oxidase Subunit 1 (COI) to assess the phylogenetic relationships and taxonomy of Nebela sensu stricto and similar taxa (Nebela group, Arcellinida) in order to clarify the taxonomic validity of morphological characters. The COI data not o ...

2012

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