Concept

Scientific visualization

Related publications (243)

Neuromapp: A Mini-application Framework to Improve Neural Simulators

Felix Schürmann, Judit Planas Carbonell, Francesco Cremonesi, Timothée Ewart, Fabien Jonathan Delalondre

The increasing complexity and heterogeneity of extreme scale systems makes the optimization of large scale scientific applications particularly challenging. Efficiently leveraging these complex systems requires a great deal of technical expertise and a con ...

Springer International Publishing2017

Natural capital data visualization to promote sustainable decision making

Charlotte Gisèle Weil

In order to develop approaches to manage environmental assets sustainably and take nature more into account in major decisions, natural capital assessments reveal the specific benefits provided by nature. Effective communication, including clear visualizat ...

2017

ASAP: a web-based platform for the analysis and interactive visualization of single-cell RNA-seq data

Bart Deplancke, Vincent Roland Julien Gardeux, Adrian Shajkofci, Petra Catalina Schwalie

Motivation: Single-cell RNA-sequencing (scRNA-seq) allows whole transcriptome profiling of thousands of individual cells, enabling the molecular exploration of tissues at the cellular level. Such analytical capacity is of great interest to many research gr ...

Oxford University Press2017

On the sloshing free surface in the draft tube cone of a Francis turbine operating in synchronous condenser mode

François Avellan, Elena Vagnoni, Loïc Andolfatto

Hydropower plants may be required to operate in synchronous condenser mode in order to supply reactive power to the grid for compensating the fluctuations introduced by the intermittent renewable energies such wind and solar. When operating in this mode, t ...

2017

In Silico Brain Imaging Physically-plausible Methods for Visualizing Neocortical Microcircuitry

Marwan Muhammad Ahmed Abdellah

The recent years have witnessed growing interest in the power of scientific visualization for simulation-based neuroscience. The research presented in this thesis develops methods to generate physically-realistic visualizations of neocortical models recons ...

EPFL2017

A Return on Our Experience of Modeling a Service-oriented Organization in a Service Cartography

Alain Wegmann, Gorica Tapandjieva Sekulovska, Giorgio Anastopoulos

We present a longitudinal project using action design research, which is a four-year collaboration between two EPFL entities: The research Laboratory for Systemic Modeling (LAMS) and EPFL’s IT department, called the VPSI. During that time the VPSI was goin ...

Springer2017

Using PyMOL as a platform for computational drug design

Shuguang Yuan, Zhenquan Hu

PyMOL, a cross-platform molecular graphics tool, has been widely used for three-dimensional (3D) visualization of proteins, nucleic acids, small molecules, electron densities, surfaces, and trajectories. It is also capable of editing molecules, ray tracing ...

Wiley2017

Reconstruction and visualization of large-scale volumetric models of neocortical circuits for physically-plausible in silico optical studies

Henry Markram, Felix Schürmann, Marwan Muhammad Ahmed Abdellah, Juan Bautista Hernando Vieites, Stefan Eilemann, Nicolas Antille

Background: We present a software workflow capable of building large scale, highly detailed and realistic volumetric models of neocortical circuits from the morphological skeletons of their digitally reconstructed neurons. The limitations of the existing a ...

2017

Compressive Embedding and Visualization using Graphs

Pierre Vandergheynst, Nathanaël Perraudin, Johann Paratte

Visualizing high-dimensional data has been a focus in data analysis communities for decades, which has led to the design of many algorithms, some of which are now considered references (such as t-SNE for example). In our era of overwhelming data volumes, t ...

arXiv e-print archive2017

A visual model for mobility practices and learnings, Or why new visualizations allow us to consider the city as a paedagogical space

Alexandre André Robert Rigal

Visualizations of the city are necessary to lead to inquiries and for designing urban and transport policies because they are needed to synthesize information, to stimulate new hypotheses, and to evoke models. However, most of the contemporary visualizatio ...

Dr. Laurent Matthey and Dr. Olivier Walther2017

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