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A method is described to extract a complete set of sequence-dependent material parameters for rigid base and basepair models of DNA in solution from atomistic molecular dynamics simulations. The method is properly consistent with equilibrium statistical me ...
In this paper, we develop a simple analysis method to infer some properties of the watershed processes from daily streamflow data. The method is built on a simple streamflow model with a link to rainfall stochasticity, which characterizes the streamflow as ...
Randomized techniques play a fundamental role in theoretical computer science and discrete mathematics, in particular for the design of efficient algorithms and construction of combinatorial objects. The basic goal in derandomization theory is to eliminate ...
A dynamic mixture of iron complexes was used as a colorimetric sensor for sulfated glycosaminoglycans. The sensing ensemble was prepared by mixing [FeCl2(H2O)4] with dipicolylamine, the functionalized bipyridyl ligand N-(6-aminohexyl)-4'-methyl-2,2'-bipyri ...
Functional connectivity analysis of fMRI data can reveal synchronized activity between anatomically distinct brain regions. Here, we exploit the characteristic connectivity graphs of task and resting epochs to perform classification between these condition ...
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In this paper, we propose a Markov chain modeling of complicated phenomena observed from coupled chaotic oscillators. Once we obtain the transition probability matrix from computer simulation results, various statistical quantities can be easily calculated ...
We investigate the ground state properties of large atoms and quantum dots described by a d-dimensional N-body Hamiltonian of confinement ZV. In atoms, d = 3 and V is the Coulomb interaction; in dots, d = 2 and V is phenomenologically determined. We expres ...
In this paper we analyze the vibrational spectra of a large ensemble of non-homologous protein structures by means of a novel tool, that we coin Hierarchical Network Model (HNM). Our coarse-grained scheme accounts for the intrinsic heterogeneity of force c ...
Magnetic impurities in solids cause manifold changes in their macroscopic properties, such as anomalous low temperature resistance due to Kondo screening, reduction of the superconducting transition temperature due to local suppression of the order paramet ...
Interface free energy is the contribution to the free energy of a system due to the presence of an interface separating two coexisting phases at equilibrium. It is also called interfacial free energy or surface tension. The content of the paper is 1) the d ...