Haplochromine

NOTOC The haplochromine cichlids are a tribe of cichlids in subfamily Pseudocrenilabrinae called Haplochromini. This group includes the type genus (Haplochromis) plus a number of closely related genera such as Aulonocara, Astatotilapia, and Chilotilapia. They are endemic to eastern, southern and northern Africa, except for Astatotilapia flaviijosephi in the Middle East. A common name in a scientific context is East African cichlids – while they are not restricted to that region, they are the dominant Cichlidae there. This tribe was extensively studied by Ethelwynn Trewavas, who made major reviews in 1935 and 1989, at the beginning and at the end of her career in ichthyology. Even today, numerous new species are being described each year. The haplochromines were in older times treated as subfamily Haplochrominae, However, the great African radiation of pseudocrenilabrine cichlids is certainly not monophyletic without them, and thus they are today ranked as a tribe therein. They do include, however, the type genus of the subfamily, Pseudocrenilabrus. Since taxonomic tribes are treated like genera for purposes of biological nomenclature according to the ICZN, the Haplochromis is the type genus of this tribe, and not the (later-described) Pseudocrenilabrus, even though the tribe name Pseudocrenilabrini was proposed earlier. In the African Great Lakes, there has been an amazing adaptive radiation of Haplochromini. Many have interesting behavior (e.g. mouthbrooding in Astatotilapia burtoni or the "sleeper" ambushes of Nimbochromis), and brilliant colours are also widespread. Males and females are often strikingly sexually dichromatic. In the aquarium hobby, these fishes are popular, however due to their often aggressive behaviors and rather unusual water parameters, they are generally unsuitable for beginners or community tanks. There are some informal names used among aquarists for Haplochromini. Generally, any and all (as well as some similar-looking Pseudocrenilabrinae) may be referred to haplos, haps or happies.

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Use of Qualitative Environmental and Phenotypic Variables in the Context of Allele Distribution Models: Detecting Signatures of Selection in the Genome of Lake Victoria Cichlids

Stéphane Joost, Michaël Kalbermatten

When searching for loci possibly under selection in the genome, an alternative to population genetics theoretical models is to establish allele distribution models (ADM) for each locus to directly correlate allelic frequencies and environmental variables s ...

Humana Press2012

Nominal and ordinal predictors in logistic regression for the identification of adaptive loci in animal and plant populations

Stéphane Joost, Michaël Kalbermatten

When searching for loci possibly under selection in the genome, an alternative to population genetics theoretical models is to establish allele distribution models for each locus to directly correlate allelic frequencies and environmental variables like pr ...

2010

Haplochromis is a ray-finned fish genus in the family Cichlidae. It has been used as the default "wastebin taxon" for Pseudocrenilabrinae cichlids of the East African Rift, and as such became the "largest" fish "genus". Many of these cichlids are popular aquarium fishes; like similar Haplochromini they are known as "haplos", "happies" or "haps" among aquarium enthusiasts. The genus was established by F.M. Hilgendorf in 1888. It was originally conceived as a subgenus of A.C.L.G.

Cichlids ˈsɪklᵻdz are fish from the family Cichlidae in the order Cichliformes. Cichlids were traditionally classed in a suborder, the Labroidei, along with the wrasses (Labridae), in the order Perciformes, but molecular studies have contradicted this grouping. On the basis of fossil evidence, it first appeared in Tanzania during the Eocene epoch, about 46–45 million years ago. The closest living relative of cichlids is probably the convict blenny, and both families are classified in the 5th edition of Fishes of the World as the two families in the Cichliformes, part of the subseries Ovalentaria.

Lake Victoria is one of the African Great Lakes. With a surface area of approximately , Lake Victoria is Africa's largest lake by area, the world's largest tropical lake, and the world's second-largest fresh water lake by surface area after Lake Superior in North America. In terms of volume, Lake Victoria is the world's ninth-largest continental lake, containing about of water. Lake Victoria occupies a shallow depression in Africa. The lake has an average depth of and a maximum depth of . Its catchment area covers .