Concept

Graph embedding

Related publications (121)

Towards improving full-length ribosome density prediction by bridging sequence and graph-based representations

Pierre Vandergheynst, Felix Naef, Cédric Gobet, Francesco Craighero, Mohan Vamsi Nallapareddy

Translation elongation plays an important role in regulating protein concentrations in the cell, and dysregulation of this process has been linked to several human diseases. In this study, we use data from ribo-seq experiments to model ribosome dwell times ...

2024

Graph-based approximate message passing iterations

Raphaël Jean Berthier

Approximate message passing (AMP) algorithms have become an important element of high-dimensional statistical inference, mostly due to their adaptability and concentration properties, the state evolution (SE) equations. This is demonstrated by the growing ...

OXFORD UNIV PRESS2023

GRAMM: Fast CGRA Application Mapping Based on A Heuristic for Finding Graph Minors

Mirjana Stojilovic, Guanglei Zhou

A graph H is a minor of a second graph G if G can be transformed into H by two operations: 1) deleting nodes and/or edges, or 2) contracting edges. Coarse-grained reconfigurable array (CGRA) application mapping is closely related to the graph minor problem ...

2023

Multi-IVE: Privacy Enhancement of Multiple Soft-Biometrics in Face Embeddings

Sébastien Marcel, Hatef Otroshi Shahreza

This study focuses on the protection of soft-biometric attributes related to the demographic information of individuals that can be extracted from compact representations of face images, called embeddings. We consider a state-ofthe-art technology for soft- ...

IEEE COMPUTER SOC2023

Equivariant Neural Architectures for Representing and Generating Graphs

Clément Arthur Yvon Vignac

Graph machine learning offers a powerful framework with natural applications in scientific fields such as chemistry, biology and material sciences. By representing data as a graph, we encode the prior knowledge that the data is composed of a set of entitie ...

EPFL2023

Scalable maximal subgraph mining with backbone-preserving graph convolutions

Karl Aberer, Thanh Trung Huynh, Quoc Viet Hung Nguyen, Thành Tâm Nguyên

Maximal subgraph mining is increasingly important in various domains, including bioinformatics, genomics, and chemistry, as it helps identify common characteristics among a set of graphs and enables their classification into different categories. Existing ...

ELSEVIER SCIENCE INC2023

Unsupervised Graph Representation Learning with Cluster-aware Self-training and Refining

Yichen Xu, Qiang Liu, Feng Yu

Unsupervised graph representation learning aims to learn low-dimensional node embeddings without supervision while preserving graph topological structures and node attributive features. Previous Graph Neural Networks (GNN) require a large number of labeled ...

New York2023

Dimensionality reduction of time-series data, and systems and devices that use the resultant embeddings

Steffen Schneider

Methods, systems, and apparatus, including computer programs encoded on a computer storage medium, for dimensionality reduction of time-series using contrastive learning. A method can include receiving multidimensional input time series data that includes ...

2023

Can Self-Supervised Neural Networks Pre-Trained on Human Speech distinguish Animal Callers?

Mathew Magimai Doss, Eklavya Sarkar

Self-supervised learning (SSL) models use only the intrinsic structure of a given signal, independent of its acoustic domain, to extract essential information from the input to an embedding space. This implies that the utility of such representations is no ...

ISCA2023

Graph Embedding for Retrieval

Chi Thang Duong

Information retrieval (IR) systems such as search engines are important for people to find what they need among the tremendous amount of data available in their organization or on the Internet. These IR systems enable users to search in a large data collec ...

EPFL2022

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