Single cell RNA-sequencing: Methods and Applications

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Clustering: Hierarchical and K-means Methods

Introduces hierarchical and k-means clustering methods, discussing construction approaches, linkage functions, Ward's method, the Lloyd algorithm, and k-means++.

Clustering: Theory and Practice

Covers the theory and practice of clustering algorithms, including PCA, K-means, Fisher LDA, spectral clustering, and dimensionality reduction.

Unsupervised Learning: Clustering Methods

Explores unsupervised learning through clustering methods like K-means and DBSCAN, addressing challenges and applications.

Clustering & Density Estimation

Covers dimensionality reduction, PCA, clustering techniques, and density estimation methods.

Clustering Methods: K-means and DBSCAN

Explores K-means and DBSCAN clustering methods, discussing properties, drawbacks, initialization, and optimal cluster selection.

Characterisation of Clusters: Homogeneity, Separability

Explores centroid, medoid, homogeneity, separability in clustering, quality evaluation, stability, expert knowledge, and clustering algorithms.

Clustering & Density Estimation

Covers clustering, PCA, LDA, K-means, GMM, KDE, and Mean Shift algorithms for density estimation and clustering.

K-means Algorithm

Covers the K-means algorithm for clustering data samples into k classes without labels, aiming to minimize the loss function.

Kernel K-Means Method

Introduces the kernel k-means method to form non-convex clusters and discusses clustering by density to identify dense regions in datasets.

Unsupervised Learning: Clustering

Explores unsupervised learning through clustering techniques, algorithms, applications, and challenges in various fields.