Molecular Dynamics: Liquid Argon Simulation

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Classical Molecular Dynamics: Simulation Setup

Explores classical molecular dynamics and simulation setup with variables and interactions.

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Protein Folding Simulations

Covers theory and practical applications of protein folding simulations using molecular dynamics, focusing on solvent effects and analysis of folding dynamics.

Simulation & Optimization: Poisson Process & Random Numbers

Explores simulation pitfalls, random numbers, discrete & continuous distributions, and Monte-Carlo integration.

Efficiency of Sampling: Ergodicity and Autocorrelation Functions

Explores the efficiency of sampling in molecular dynamics, focusing on ergodicity and autocorrelation functions.

Integration Algorithms for Molecular Dynamics

Explores various Verlet algorithms for molecular dynamics simulations, emphasizing accuracy and efficiency.

Modeling Prisoner's Dilemma: Naive vs. Optimal

Explores the modeling of the '100 prisoners' problem and compares naive and optimal approaches.

Copulas: Dependence Structures and Simulation

Covers copulas, dependence structures, simulation techniques, and properties of copula densities.

Copulas: Dependence Modeling

Covers copulas, Sklar's Theorem, types of copulas, and simulation of copulas for risk management.

Coarse-Grained Simulations: Basics and Applications

Covers coarse-grained simulations, including advantages, schemes, DPD algorithm, lipid membrane coarse-graining, and setting interaction parameters.