Using AGEA in the Allen Mouse Brain Atlas

This lecture introduces the Anatomic Gene Expression Atlas (AGEA), a unique tool based on gene expression data from the Allen Mouse Brain Atlas. AGEA allows users to explore the 3D atlas of the adult C57 Black mouse brain, characterizing brain regions solely based on gene expression patterns. The tutorial covers how to navigate the application, interpret the correlation maps, use the clustering tool, and find specific gene expression profiles within brain regions. By utilizing AGEA, researchers can gain insights into the relationship between gene expression and brain anatomy, enhancing their understanding of brain organization.