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Daniel Marbach

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Related publications (9)

Please note that this is not a complete list of this person’s publications. It includes only semantically relevant works. For a full list, please refer to Infoscience.

Beyond Graphs: A New Synthesis

Dario Floreano, Claudio Mattiussi, Daniel Marbach, Peter Dürr

Artiﬁcial neural networks, electronic circuits, and gene networks are some examples of systems that can be modeled as networks, that is, as collections of interconnected nodes. In this paper we introduce the concept of terminal graph (t-graph for short), w ...

2011

GeneNetWeaver: In silico benchmark generation and performance profiling of network inference methods

Dario Floreano, Daniel Marbach, Thomas Schaffter

Motivation: Over the last decade, numerous methods have been developed for inference of regulatory networks from gene expression data. However, accurate and systematic evaluation of these methods is hampered by the difficulty of constructing adequate bench ...

Oxford University Press2011

Towards a Rigorous Assessment of Systems Biology Models: The DREAM3 Challenges

Background: Systems biology has embraced computational modeling in response to the quantitative nature and increasing scale of contemporary data sets. The onslaught of data is accelerating as molecular profiling technology evolves. The Dialogue for Reverse ...

Public Library of Science2010