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Anne-Florence Raphaëlle Bitbol

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Anne-Florence Raphaëlle Bitbol

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Protein language models trained on multiple sequence alignments learn phylogenetic relationships

Correlations from structure and phylogeny combine constructively in the inference of protein partners from sequences

Evolutionary history expands the range of signaling interactions in hybrid multikinase networks

Resist or perish: Fate of a microbial population subjected to a periodic presence of antimicrobial

Adapt or Perish: Evolutionary Rescue in a Gradually Deteriorating Environment

Spatiotemporal pattern formation in E. coli biofilms explained by a simple physical energy balance

Statistical physics of interacting proteins: Impact of dataset size and quality assessed in synthetic sequences

Mitochondrial cristae modeled as an out-of-equilibrium membrane driven by a proton field

Antibody‐mediated crosslinking of gut bacteria hinders the spread of antibiotic resistance

Phylogenetic correlations can suffice to infer protein partners from sequences