Enhanced biodegradation of hexachlorocyclohexane (HCH) in contaminated soils via inoculation with Sphingobium indicum B90A

Abstract Soil pollution with hexachlorocyclohexane (HCH) has caused serious environmental problems. Here we describe the targeted degradation of all HCH isomers by applying the aerobic bacterium Sphingobium indicum B90A. In particular, we examined possibilities for large-scale cultivation of strain B90A, tested immobilization, storage and inoculation procedures, and determined the survival and HCH-degradation activity of inoculated cells in soil. Optimal growth of strain B90A was achieved in glucose-containing mineral medium and up to 65% culturability could be maintained after 60 days storage at 30°C by mixing cells with sterile dry corncob powder. B90A biomass produced in water supplemented with sugarcane molasses and immobilized on corncob powder retained 15–20% culturability after 30 days storage at 30°C, whereas full culturability was maintained when cells were stored frozen at −20°C. On the contrary, cells stored on corncob degraded γ-HCH faster than those that had been stored frozen, with between 15 and 85% of γ-HCH disappearance in microcosms within 20 h at 30°C. Soil microcosm tests at 25°C confirmed complete mineralization of [14C]-γ-HCH by corncob-immobilized strain B90A. Experiments conducted in small pits and at an HCH-contaminated agricultural site resulted in between 85 and 95% HCH degradation by strain B90A applied via corncob, depending on the type of HCH isomer and even at residual HCH concentrations. Up to 20% of the inoculated B90A cells survived under field conditions after 8 days and could be traced among other soil microorganisms by a combination of natural antibiotic resistance properties, unique pigmentation and PCR amplification of the linA genes. Neither the addition of corncob nor of corncob immobilized B90A did measurably change the microbial community structure as determined by T-RFLP analysis. Overall, these results indicate that on-site aerobic bioremediation of HCH exploiting the biodegradation activity of S. indicum B90A cells stored on corncob powder is a promising technology.

Fonctionnement hydrique de différents types de placages sableux dans le sahel burkinabè

Dial Niang

The study was performed in the Sahelian part of Burkina Faso. The country is subject to difficult climatic conditions, a strong demographic growth and a continuous decrease in soil fertility. The resulting degradation affects the processes which govern ecological systems and leads, on the long run, to a modification of the ecosystems. This is particularly the case of the eolian formations, the only ecological units susceptible of being useful in the area, since they present good infiltration capacity and support the main part of the vegetation. Field measurements (rainfall, runoff, saturated hydraulic conductivity, bulk density, hydraulic conductivity function, soil water content and pressure head) have been done to asses the impacts of the environmental degradation on the hydrodynamic behavior of these formations. Within this context, an experimental device made of seven measurement sites has been installed in three contrasting zones. The results show significant differences in the hydrodynamic behavior of the soils, according to their surface properties. On one hand, the sites located on an erosion crust as well as on a drying crust in transition towards an erosion crust, are characterized by a low infiltration capacity which favors runoff. The quantity of infiltrated water is very low when compared to total precipitation. Water is stored near the soil surface (in the first 30 cm) favoring evaporation in the days following rainfall events. Thus, little water is available for plants. The resulting water stress causes a weak density, or even complete absence of plants which have difficulties to colonize such surfaces. Surface runoff is favored with runoff coefficients ranging from 50 to 80 %. On the other hand, the sites situated on drying crusts are characterized by good hydraulic conductivity and infiltration capacity. The storage of water in the root zone is more important. Water flows deeper into the soil and, occasionally, drains at the reference depth of 50 cm. The runoff coefficients were found to be lower than in the other sites (30 to 40 %). This differentiated behavior is one of the main factors affecting the formation of different landscapes in the area through the existence of a relationship between soil surface properties, the type of landscape and the ratio runoff/infiltration. The sites located on an erosion crust and those in transition towards an erosion crust behave like impluviums, while those situated on drying crusts are more favorable to infiltration. Observation of the evolution of the hydraulic properties of the soil surface shows a progressive alteration that frequently leads to strongly degraded mediums unfavorable to plants. Control and rehabilitation methods considered in the study, namely "restoration" and "mise en défens" have only partial and time-limited effects; they do not make it possible to stop durably degradation or to favor rehabilitation. Among the other measures assessed on the INERA plots, only the restitution to the soil of the beforehand mown plants causes an improvement of the soil surface properties; the restitution causes the formation of an important macroporal system favoring water infiltration and circulation in the soil. The effects of those different measures occur mainly in the first years after their introduction and concern especially vegetation regeneration, soil protection against degradation factors, improvement of hydrodynamic soil properties, reduction of runoff and erosion. They make it possible to slow down soil degradation, but not to stop it definitively. Within this context, proposals of further studies focussed on other measures to control and rehabilitate degraded areas have been suggested, taking into account the specificity of the sahelian zone, the endogenous knowledge of the agro-pastors, as well as socio-economic and ecological conditions.

EPFL2006

Carbon, oxygen and nitrogen dynamics in a soil profile: Model development and application

David Andrew Barry, Jordi Batlle-Aguilar, Alessandro Brovelli

In order to meet demands for crops, pasture and firewood, the rate of land use change from forested to agricultural uses steadily increased over several decades, resulting in an increased release of nutrients towards groundwater and surface water bodies. In parallel, the degradation of riparian zones has diminished their capacity to provide critical ecosystem functions, such as the ability to control and buffer nutrient cycles. In recent years, however, the key environmental importance of natural, healthy ecosystems has been progressively recognized and restoration of degraded lands towards their former natural state has become an area of active research worldwide. Land use changes and restoration practices are known to affect both soil nutrient dynamics and their transport to neighboring areas. To this end, in order to interpret field experiments and elucidate the different mechanisms taking place, numerical tools are beneficial. Microbial decomposition is the main driving force on biogeochemical transformations of soil organic matter and soil nutrients. The activity of the soil biota is primarily controlled by water availability and by the pore-solution oxygen concentrations, which ultimately depend to a large extent on meteorological conditions, e.g., precipitation. In this work a model is presented that simulates carbon and nitrogen turnover and transport in a 1D profile under variably-saturated conditions. The model is based on the mechanistic batch model of Porporato et al. (Adv. Water Res., 26: 45-58, 2003), but extends its capabilities to simulate the vertical transport of the mobile components. Furthermore, oxygen dynamics are included such that the pore-water concentration is dependent on microbial degradation rates and soil moisture level. The model was applied to simulate the effect of land use change from forested to agricultural soils on pedo-fauna activity and nutrient distribution and abundance across the vertical profile. External forcing, i.e., precipitation time series, were generated stochastically. Modeling results showed that soil tillage practices, which modify soil structure and thus soil aeration, were responsible for higher decomposition and mineralization rates in agricultural soils, thus for the lower soil carbon and nitrogen concentrations. Furthermore, higher plant uptake rates and leaching of agricultural soils contributed also to lower nitrate concentrations in such soils.

2009

The effect of seasonal soil frost on the alpine groundwater recharge including climate change aspects

Daniel Bayard

In alpine areas, the snow cover plays an important role as a water reservoir. Water is stored as snow over the winter and released in spring, recharging mountain aquifers through infiltration. These aquifers are essential, especially for supplying water for human activities during dry seasons. Numerous studies have shown that locally soil frost can drastically reduce the water infiltration. However, we know much less about the hydrological impact of soil frost at a larger scale, in particular with regard to groundwater recharge. This was our motivation for initiating an extensive field experiment in the southern Swiss Alps. Several methods at different spatial scales were adapted to explore (a) the local effect of a partially frozen ground on the snowmelt discharge in an alpine area, (b) the key processes influencing groundwater recharge during snowmelt periods, such as snow cover and soil frost evolution, snowmelt water runoff types, (c) the large-scale effect of soil frost on the aquifer recharge, and (d) winter situations that are critical with respect to flooding. In order to take into account spatial, altitudinal and climatic differences, the field study was run for two winter seasons at Gd St Bernard (2500 m), a site with very high winter precipitation and strong winds, and at Hannigalp above Grächen (2100 m), a ski resort with a rather dry winter climate. The different components of the soil water balance (lateral runoff, deep percolation, liquid soil water content) were measured on delimited plots of 5 m2. Additionally, a dye tracer experiment visualized the snowmelt infiltration patterns into the frozen, respectively non-frozen ground. At Gd St Bernard, investigations of the liquid water content and the soil temperature were additionally conducted at two secondary sites, differing in their orientation, so as to gain a better insight of the spatial soil frost expansion. Finally, an analysis of the water-table variation at the village of Grächen (some 500 m below Hannigalp) during the snowmelt was carried out for a 10-year time period, including our experimental seasons. We complemented our field investigations by using a numerical soil-snow-atmosphere transfer model that simulates the seasonal development of the soil frost and the snow cover, as well as lateral and vertical water flow in the top soil. This model was used as an upper boundary condition to a 2-D groundwater model, to calculate the outlet flow at the base of a simplified alpine aquifer. The two winters investigated had contrasting meteorological conditions, which resulted in intriguing differences and similarities with respect to the soil physical conditions: the first one having a thick snowpack and hardly any soil frost, and the second one with hardly any snow until January and a deep and persistent soil frost. In spite of a very thick snowpack, the water balance measurements from winter 2000/2001 showed for both sites zero to low surface and subsurface flow due to the fact that soil frost was local and the soil permeability high. During the next winter, approximately 25% of the total meltwater run off laterally. The soil infiltration capacity was mainly reduced by the presence of a basal ice sheet, caused by the freezing of meltwater after a mid-winter snowmelt event. The field data were used to calibrate and validate a physically-based one-dimensional model. To allow an accurate parameter setting for the water repellent soil of Hannigalp, laboratory infiltration experiments on soil columns were additionally carried out. Using the resultant information, the model predicted correctly most measured soil parameters, in particular good matching was observed between measured and simulated snowmelt discharge. At Gd St Bernard, the simulated results were less satisfactory, especially during the first winter, when large discrepancies were noted between measured and simulated lateral runoff. Apart from the shortage in the soil parameter characterization, the deviation was a result of the simplified description of the experimental field. The model was, for example, not able to simulate surface runoff generated by a steep slope under unfrozen conditions, as the soil surface is considered by the model to be flat. Nevertheless, results were accurate enough to reproduce the occurrences of snowmelt events and the accumulated values of snow-melt discharge pathways under frozen conditions. Long-term weather data were used to simulate the soil frost depth at both sites. The simulation results showed that the probability of the occurrence of frozen soils was lowest on slopes with south or north exposure. On southerly exposed plots, the heat stored in the soil during the summer inhibited the development of deep and persistent soil frost, while most pore ice thawed due to underneath heating. On north plots, the building of soil frost was rare, as early snowfall insulated the ground from the atmosphere. However, during snow-poor winters, the frost penetrated deep into the ground, and the low underneath heat flux at that location hardly affected the frost depth until snowmelt. The snow depth and average soil temperature were hence the two components affecting the frost depth extent. The altitude soil frost variation was related to the spatial extent of these two components. The higher the altitude, the higher the precipitation and the lower the mean air/surface temperature. Simulating the whole Grächen recharge area, seasonal soil frost was rare between 1800 m and 2000 m, as the snowpack was thick enough to insulate the ground, and the soil was warm enough to inhibit deep soil frost. In lower areas, the shallow snowpack enabled the soil to freeze during most winters, whereas at higher areas, deep and persistent soil frost was simulated due to the low underneath heating. A 10-year water-table depth record was used to examine possible large-scale effects of seasonal soil frost. We noted that the water-table rise at snowmelt was lowest at the end of winters with extensive soil frost. However, such winters were characterized by low precipitation, and reduced snow cover. In contrast, winters with little soil frost were mostly snow rich. Consequently, only a reduced number of winters were directly comparable. Considering these winters, the reduction in the water-table rise at snowmelt due to seasonal soil frost varied only between 10 and 30%, as, during snowmelt, most meltwater was able to re-infiltrate into the very permeable ground in lower unfrozen areas. We may assume that a soil with a smaller infiltration capacity can increase the influence of the soil frost on the aquifer recharge. Finally, we investigated the effect of a changing climate on the hydraulic and thermic regimes at different altitudes in the area of Grächen. We assume an increase in the air temperature of 2°C generates deeper soil frost on lower areas, as the resultant smaller snow cover does not insulate the soil from the atmosphere any more. However, it does reduce the soil frost on higher, snow rich areas, due to the warmer air temperature. As a whole, minor changes were simulated on the mean groundwater recharge, as more/less meltwater was able to infiltrate in higher/lower areas. By increasing additionally the precipitation by 15%, the soil frost diminished slightly over the whole catchment. By combining both climate change scenarios, we may expect an increase in extreme events, as, on the one hand, the rainfall intensity increases, and, on the other hand, rain on snow events over frozen soils occurs more often in lower areas. In practice, this work shows the importance of better investigating the hydrothermal behaviour of alpine regions. Such a knowledge is necessary, as more and more efforts are put into managing efficiently, durably and globally the available water resources. This work stresses also the necessity to consider seasonally soil frost in alpine risk management. As an example, flooding is mostly a consequence of strong rain precipitation at high altitudes combined with heavy snowmelt. Obviously, the risk of extreme runoff events increases during frozen winters, when the soil infiltration capacity is further reduced by the soil ice. Also, it has been shown that unstable slopes are mostly related to specific hydrogeological situations, like strong precipitation, which induces a sharp increase in the underneath water circulation. The melt water in spring is hence a potential activating factor, and a frozen soil may reduce the risk of sliding, as less water infiltrates into the ground.

EPFL2003