IMPACT: Interval-based Multi-pass Proteomic Alignment with Constant Traceback
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Evolutionary algorithms are widespread heuristic methods inspired by natural evolution to solve difficult problems for which analytical approaches are not suitable. In many domains experimenters are not only interested in discovering optimal solutions, but ...
This editorial introduction describes the aims and scope of the special issue of the ACM Transactions on Interactive Intelligent Systems on Behavior Understanding for Arts and Entertainment, which is being published in issues 2 and 3 of volume 5 of the jou ...
Sequence motifs are of greater biological importance in nucleotide and protein sequences. The conserved occurrence of identical motifs represents the functional significance and helps to classify the biological sequences. In this paper, a new algorithm is ...
Energy-efficient design of multimedia embedded systems demands optimizations in both hardware and software. Software optimization has no received much attention, although modern multimedia applications exhibit high resource utilization. In order to efficie ...
The rapid accumulation of sequenced genomes offers the chance to resolve longstanding questions about the evolutionary histories, or phylogenies, of groups of organisms. The relatively rare occurrence of large-scale evolutionary events in a whole genome, e ...
The evolutionary relationships between organisms or phylogenies are fundamental to biology. They are invaluable as guiding tools to mine, organize and exploit the enormous amounts of biological data in the post-genomic era. The advent of high-throughput se ...
Energy-efficient design of multimedia embedded systems demands optimizations in both hardware and software. Software optimization has no received much attention, although modern multimedia applications exhibit high resource utilization. In order to efficie ...
In this paper we describe a new methodology for optimising building and urban geometric forms for the utilisation of solar irradiation, whether by passive or active means. For this we use a new evolutionary algorithm(a hybrid CMA-ES/HDE algorithm) to searc ...
Correlation-based alignment is an alternative alignment method for electron beam lithography. Using complex marker patterns, such as Penrose patterns, which contain more positional information, greater alignment accuracy can be achieved. Correlation-based ...
New multimedia embedded applications are increasingly dynamic, and rely on dynamically-allocated data types (DDTs) to store their data. The optimization of DDTs for each target embedded system is a time-consuming process due to the large searching space of ...