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Rapid identification and interpretation of gene‐environment associations using the new R.SamBada landscape genomics pipeline

Related publications (36)

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Mining gene sets for measuring similarities

Giovanni De Micheli, Luca Benini

In recent years, the development of high throughput devices for the massive parallel analyses of genomic data has lead to the generation of large amount of new biological evidences and has triggered the proliferation of data mining algorithms for the extra ...

2006

Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans

Pierre Gönczy

A key challenge of functional genomics today is to generate well-annotated data sets that can be interpreted across different platforms and technologies. Large-scale functional genomics data often fail to connect to standard experimental approaches of gene ...

2005

Rapid and selective surveillance of Arabidopsis thaliana genome annotations with Centrifuge

Florence Armand, Philipp Bucher

Centrifuge is a user-friendly system to simultaneously access Arabidopsis gene annotations and intra- and inter-organism sequence comparison data. The tool allows rapid retrieval of user-selected data for each annotated Arabidopsis gene providing, in any c ...

Oxford University Press2005

Functional genomic analysis of cell division in C. elegans using RNAi of genes on chromosome III

Pierre Gönczy

Genome sequencing projects generate a wealth of information; however, the ultimate goal of such projects is to accelerate the identification of the biological function of genes. This creates a need for comprehensive studies to fill the gap between sequence ...

2000

[What can be expected from sequencing of the Mycobacterium tuberculosis genome?]

Stewart Cole

Mycobacterium tuberculosis, the scourge of humanity, is one of the most successful and scientifically challenging pathogens of all time. To catalyze the conception of new prophylactic and therapeutic interventions against tuberculosis, and to enhance our u ...

2000

Bacterial genomics

Stewart Cole

During the last decade, great advances have been made in the study of bacterial genomes which is perhaps better described by the term bacterial genomics. The application of powerful techniques, such as pulsed-field gel electrophoresis of macro-restriction ...

1994