Publications related to Advances in computational and statistical diffusion MRI

Live-cell imaging powered by computation

The proliferation of microscopy methods for live-cell imaging offers many new possibilities for users but can also be challenging to navigate. The prevailing challenge in live-cell fluorescence microscopy is capturing intra-cellular dynamics while preservi ...

Berlin2024

Orchestrating chromosome conformation capture analysis with Bioconductor

Genome-wide chromatin conformation capture assays provide formidable insights into the spatial organization of genomes. However, due to the complexity of the data structure, their integration in multi-omics workflows remains challenging. We present data st ...

2024

Hausdorff dimension of fermions on a random lattice

Mattia Guerino Varrone

Geometric properties of lattice quantum gravity in two dimensions are studied numerically via Monte Carlo on Euclidean Dynamical Triangulations. A new computational method is proposed to simulate gravity coupled with fermions, which allows the study of int ...

Elsevier2024

EncodingActs: Modeling, Representing and Transmitting Embodied Knowledge in Traditional Martial Arts

Yumeng Hou

EncodingActs investigates how computational methods can facilitate the transmission of multifaceted knowledge within intangible cultural heritage (ICH). ICH, characterized by living, tacit, yet complex epistemic systems, is conventionally viewed as challen ...

EPFL2024

From Automated Bootstrapping to Collaborative Editing: A Framework for 4D City Reconstruction

Rémi Guillaume Petitpierre, Paul Robert Guhennec, Beatrice Vaienti, Didier Louis Dupertuis

We propose a framework for the construction of 4D scientific models for cities of the past. It leverages both the use of computational methods for bootstrapping, and a collaborative interface for visualisation and edition. This permits to continuously enri ...

Zenodo2023

An Industrial West? Analyzing Multilingual Newspapers Discourses about Technology during the Second Industrial Revolution (1840-1930)

While the idea of technology as a driving force of history and society has been extensively studied in the history of the Industrial Revolutions, little attention has been paid to the social perception of those technologies. This thesis focuses on the disc ...

2023

Fast in vivo assay of creatine kinase activity in the human brain by P-31 magnetic resonance fingerprinting

Lijing Xin, Daniel Wenz, Mark Stephan Widmaier, Songi Lim

A new and efficient magnetisation transfer P-31 magnetic resonance fingerprinting (MT-P-31-MRF) approach is introduced to measure the creatine kinase metabolic rate kCK

{k}_{\mathrm{CK}}

between phosphocreatine (PCr) and adenosine triphosphate (ATP) i ...

WILEY2023

3DHumanGAN: 3D-Aware Human Image Generation with 3D Pose Mapping

Zhuoqian Yang, Siyuan Li

We present 3DHumanGAN, a 3D-aware generative adversarial network that synthesizes photo-like images of fullbody humans with consistent appearances under different view-angles and body-poses. To tackle the representational and computational challenges in sy ...

Ieee Computer Soc2023

Computational tools and resources for designing new pathways to small molecules

Vassily Hatzimanikatis, Anastasia Sveshnikova

The metabolic engineering community relies on computational methods for pathway design to produce important small molecules in microbial hosts. Metabolic network databases are continuously curated and updated with known and novel reactions that expand the ...

CURRENT BIOLOGY LTD2022

Reconstruction of the Hippocampus

Henry Markram, Felix Schürmann, Armando Romani, Michele Migliore

The hippocampus is a widely studied brain region thought to play an important role in higher cognitive functions such as learning, memory, and navigation. The amount of data on this region increases every day and delineates a complex and fragmented picture ...

Springer2022

Advances in computational and statistical diffusion MRI

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Live-cell imaging powered by computation

Orchestrating chromosome conformation capture analysis with Bioconductor

Hausdorff dimension of fermions on a random lattice

EncodingActs: Modeling, Representing and Transmitting Embodied Knowledge in Traditional Martial Arts

From Automated Bootstrapping to Collaborative Editing: A Framework for 4D City Reconstruction

An Industrial West? Analyzing Multilingual Newspapers Discourses about Technology during the Second Industrial Revolution (1840-1930)

Fast in vivo assay of creatine kinase activity in the human brain by P-31 magnetic resonance fingerprinting

3DHumanGAN: 3D-Aware Human Image Generation with 3D Pose Mapping

Computational tools and resources for designing new pathways to small molecules

Reconstruction of the Hippocampus

Live-cell imaging powered by computation

An Industrial West? Analyzing Multilingual Newspapers Discourses about Technology during the Second Industrial Revolution (1840-1930)

Orchestrating chromosome conformation capture analysis with Bioconductor

Hausdorff dimension of fermions on a random lattice

Reconstruction of the Hippocampus

EncodingActs: Modeling, Representing and Transmitting Embodied Knowledge in Traditional Martial Arts

Fast in vivo assay of creatine kinase activity in the human brain by P-31 magnetic resonance fingerprinting

From Automated Bootstrapping to Collaborative Editing: A Framework for 4D City Reconstruction

3DHumanGAN: 3D-Aware Human Image Generation with 3D Pose Mapping

Computational tools and resources for designing new pathways to small molecules