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GAP: Differentially Private Graph Neural Networks with Aggregation Perturbation

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The connection of the acyclic disconnection and feedback arc sets - On an open problem of Figueroa et al.

Lukas Fritz Felix Vogl

We examine the connection of two graph parameters, the size of a minimum feedback arcs set and the acyclic disconnection. A feedback arc set of a directed graph is a subset of arcs such that after deletion the graph becomes acyclic. The acyclic disconnecti ...

Elsevier2024

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Translation elongation plays an important role in regulating protein concentrations in the cell, and dysregulation of this process has been linked to several human diseases. In this study, we use data from ribo-seq experiments to model ribosome dwell times ...

2024

Graph machine learning offers a powerful framework with natural applications in scientific fields such as chemistry, biology and material sciences. By representing data as a graph, we encode the prior knowledge that the data is composed of a set of entitie ...

EPFL2023

Enforcing Privacy in Distributed Learning With Performance Guarantees

Ali H. Sayed, Stefan Vlaski, Elsa Rizk

We study the privatization of distributed learning and optimization strategies. We focus on differential privacy schemes and study their effect on performance. We show that the popular additive random perturbation scheme degrades performance because it is ...

Piscataway2023

Graph Neural Networks (GNNs) have emerged as a powerful tool for learning on graphs, demonstrating exceptional performance in various domains. However, as GNNs become increasingly popular, new challenges arise. One of the most pressing is the need to ensur ...

EPFL2023

GRAMM: Fast CGRA Application Mapping Based on A Heuristic for Finding Graph Minors

Mirjana Stojilovic, Guanglei Zhou

A graph H is a minor of a second graph G if G can be transformed into H by two operations: 1) deleting nodes and/or edges, or 2) contracting edges. Coarse-grained reconfigurable array (CGRA) application mapping is closely related to the graph minor problem ...

2023

Scalable Computation of Dynamic Flow Problems via Multimarginal Graph-Structured Optimal Transport

Isabel Haasler, Axel Ringh, Yiqiang Chen

In this work, we develop a new framework for dynamic network flow pro-blems based on optimal transport theory. We show that the dynamic multicommodity minimum-cost network flow problem can be formulated as a multimarginal optimal transport problem, where t ...

2023

Graph neural networks for dynamic modeling of roller bearings

Olga Fink, Vinay Sharma

Machine learning has paved the way for the real-time monitoring of complex infrastructure and industrial systems. However, purely data-driven methods have not been able to learn the underlying dynamics and generalize them to operating conditions that have ...

PHM Society2023

DiGress: Discrete Denoising diffusion for graph generation

Pascal Frossard, Volkan Cevher, Igor Krawczuk, Bohan Wang, Clément Arthur Yvon Vignac

This work introduces DiGress, a discrete denoising diffusion model for generating graphs with categorical node and edge attributes. Our model utilizes a discrete diffusion process that progressively edits graphs with noise, through the process of adding or ...

2023

Nature vs. Nurture: Feature vs. Structure for Graph Neural Networks

Karl Aberer, Thành Tâm Nguyên, Chi Thang Duong

Graph neural networks take node features and graph structure as input to build representations for nodes and graphs. While there are a lot of focus on GNN models, understanding the impact of node features and graph structure to GNN performance has received ...

ELSEVIER2022