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Constructing a tree from homeomorphic subtrees, with applications to computational evolutionary biology

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Constrained Binary Identification Problem

Amin Karbasi, Morteza Zadimoghaddam

We consider the problem of building a binary decision tree, to locate an object within a set by way of the least number of membership queries. This problem is equivalent to the “20 questions game” of information theory and is closely related to lossless so ...

2013

Message-Passing Algorithms for Quadratic Minimization

Nicholas Ruozzi

Gaussian belief propagation (GaBP) is an iterative algorithm for computing the mean (and variances) of a multivariate Gaussian distribution, or equivalently, the minimum of a multivariate positive definite quadratic function. Sufficient conditions, such as ...

Microtome Publ2013

Accelerating Spatial Range Queries

Anastasia Ailamaki, Thomas Heinis, Farhan Tauheed, Alexandros Stougiannis

It is increasingly common for domain scientists to use computational tools to build and simulate spatial models of the phenomena they are studying. The spatial models they build are more and more detailed as well as dense and are consequently difficult to ...

2013

Graph-Based Information Processing

Amin Karbasi

We live in a world characterized by massive information transfer and real-time communication. The demand for efficient yet low-complexity algorithms is widespread across different fields, including machine learning, signal processing and communications. Mo ...

EPFL2012

An Efficient Algorithm for Level Set Method Preserving Distance Function

Jean-Philippe Thiran, Xavier Bresson, Dominique Zosso, Virginia Estellers Casas

The level set method is a popular technique for tracking moving interfaces in several disciplines including computer vision and fluid dynamics. However, despite its high flexibility, the original level set method is limited by two important numerical issue ...

Institute of Electrical and Electronics Engineers2012

A Speculation-Friendly Binary Search Tree

Vincent Gramoli

We introduce the first binary search tree algorithm designed for speculative executions. Prior to this work, tree structures were mainly designed for their pessimistic (non-speculative) accesses to have a bounded complexity. Researchers tried to evaluate t ...

Assoc Computing Machinery2012

NoRSE: noise reduction and state evaluator for high-frequency single event traces

Ardemis Anoush Boghossian

Summary: NoRSE was developed to analyze high-frequency datasets collected from multistate, dynamic expts., such as mol. adsorption and desorption onto carbon nanotubes. As technol. improves sampling frequency, these stochastic datasets become increasingly ...

2012

Capturing and Animating the Morphogenesis of Polygonal Tree Models

Boris Neubert

Given a static tree model we present a method to compute developmental stages that approximate the tree's natural growth. The tree model is analyzed and a graph-based description its skeleton is determined. Based on structural similarity, branches are adde ...

Assoc Computing Machinery2012

Complexity of the critical node problem over trees

Marco Di Summa

In this paper we deal with the critical node problem (CNP), i.e., the problem of searching for a given number K of nodes in a graph G, whose removal minimizes the (weighted or unweighted) number of connections between pairs of nodes in the residual graph. ...

2011

Chebyshev polynomial approximation for transductive learning on graphs

Nathanaël Perraudin

The goal of transductive learning is to find a way to recover the labels of lots of data with only a few known samples. In this work, we will work on graphs for two reasons. First, it’s possible to construct a graph from a given dataset with features. The ...

2011