Concept
Réseau métabolique
Publications associées (222)
Navigating and Managing the Complexity of Genome Scale Metabolic Networks for Studies in Cellular Physiology and Industrial Biotechnology
Metabolism is a network of biochemical reactions that converts carbon sources to cellu-lar fuels and building blocks. Metabolism of many organisms has been studied for many decades. These studies define metabolism as a very large and complex network. Stoic ...
EPFL2016iSCHRUNK – In Silico Approach to Characterization and Reduction of Uncertainty in the Kinetic Models of Genome-scale Metabolic Networks
Vassily Hatzimanikatis, Ljubisa Miskovic, Stefano Andreozzi
Accurate determination of physiological states of cellular metabolism requires detailed information about metabolic fluxes, metabolite concentrations and distribution of enzyme states. Integration of fluxomics and metabolomics data, and thermodynamics-base ...
Academic Press Inc Elsevier Science2016“ATLAS of Biochemistry”: A repository of all possible biochemical reactions for synthetic biology, metabolic engineering and metabolomics studies
Vassily Hatzimanikatis, Jasmin Maria Hafner, Adrian Shajkofci, Noushin Hadadi, Aikaterini Zisaki
Recent technical and analytical progress in the field of metabolomics has lead to the identification of vast amounts of new compounds in living organisms. However, the integration of these compounds into the context of known metabolism remains difficult. T ...
2016Nutritional input from dinoflagellate symbionts in reef-building corals is minimal during planula larval life stage
Anders Meibom, Isabelle Domart-Coulon, Christophe Kopp
Dispersion of larval offspring is of fundamental ecological importance to sessile marine organisms. Photosymbiotic planulae emitted by many reef-forming corals may travel over large distances before settling to form a new colony. It is not clear whether th ...
Amer Assoc Advancement Science2016In Silico Atom Labeling for the Reconstruction of Atom-mapped Metabolic Networks
Vassily Hatzimanikatis, Jasmin Maria Hafner, Noushin Hadadi
Field of atom mapping of metabolic networks is lacking an automated approach, which accounts for the information of reaction mechanism for atom mapping and is extendable from atom-mapped reactions to atom-mapped reaction networks. We developed “iAM.NICE” ( ...
2015