Reprogrammation épigénétique

Résumé

La reprogrammation désigne en épigénétique l’effaçage et le remodelage des marques épigénétiques telles que la méthylation de l’ADN. Après la fertilisation, des cellules de l’embryon migrent jusqu’à la crête génitale où elles deviendront finalement des cellules germinales. Dans les cellules de la lignée germinale, les génomes paternel et maternel portant une empreinte doivent être reprogrammés lors de la gamétogenèse, c’est-à-dire déméthylés et reméthylés. Cette reprogrammation, qui est sans doute une condition de la totipotence/pluripotence des cellules de l'embryon, efface en principe les changements épigénétiques. En cas de clonage, la manipulation de l’embryon avant l’implantation perturbe le mode de méthylation au niveau des loci d’empreinte. Reprogrammation artificielle La reprogrammation peut être induite artificiellement par l’introduction de facteurs exogènes, en général des facteurs de transcription. La reprogrammation artificielle est employée principalement pou

Source officielle

https://fr.wikipedia.org/wiki/Reprogrammation_%C3%A9pig%C3%A9n%C3%A9tique

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Publications associées (19)

The thymus is a primary lymphoid organ where bone marrow derived T-cell progenitors come in contact with a unique microenvironment able to sustain their maturation into functional T-cells. This fundamental immunological function of the thymus is supported by thymic epithelial cells, which represent the main component of the thymic stroma. The thymic stroma is organized in a characteristic tridimensional structure that can be distinguished into two main regions, namely, the cortex and medulla. These two regions are responsible for two fundamental processes in the thymus: the positive- and negative- selection of T-cells. The first one involves the selection of T-cells able to react with antigens presented mainly on the surface of cortical cells. T-cell negative selection, meanwhile, is responsible for the elimination of self-reactive T-cells and it is mainly carried out by medullary thymic epithelial cells. The thymic epithelium derives from the primitive endoderm and cortical and medullary thymic epithelial cells have been demonstrated to originate from a common embryonic progenitor population. Currently, the presence of such population has not been described in adult animals and the mechanisms responsible for the maintenance of the post-natal thymus have yet to be clarified. Recently, Bonfanti and colleagues demonstrated that the rat thymus contains a population of clonogenic epithelial cells (rTECs), able to self-renew in the culture system developed in 1975 for epidermal stem cells [Bonfanti et al., 2010, Rheinwald and Green, 1975]. As clonogenicity is a property of skin and other stratified epithelia stem cells, the clonogenic capacity of TECs suggests them as potential thymic epithelial stem cells. Bonfanti and colleagues also demonstrated that rTECs displayed the capacity to integrate into a thymic microenvironment and to express thymic functional markers. The work described in this thesis aims to investigate the stem cell potency and the regenerative capacity of the human thymus. We demonstrated that the human thymus also contains a population of clonogenic thymic epithelial cells (hTECs) able to self-renew and to maintain a general thymic phenotype in the culture system used for skin stem cells and for rTECs. By clonal analysis, we showed that hTECs can be distinguished in three sub-populations, which displayed different molecular phenotypes and different growth and differentiation potentials in vitro. We then investigated the role of Foxn1 transcription factor in hTECs, as Foxn1 is know to be involved in thymic epithelial cells differentiation during development and also in the maintenance of the adult thymus in mice. By experimentally down-regulating Foxn1, we demonstrated that Foxn1 expression is required to sustain the growth of one of the described hTEC sub-populations. We next investigated the differentiation capacity of clonogenic hTECs. Currently, additional experiments are still required to assess hTECs ability to integrate and differentiate in a functional thymic environment. Bonfanti and colleagues also demonstrated that rTECs, if challenged in a hair follicle morphogenetic assay, can be reprogrammed into skin stem cells. Therefore, we decided to investigate the potential of hTECs in an epidermal differentiation assay. In these conditions, hTECs did not show the ability to differentiate into epidermis, probably due to the absence in this assay of the strong morphogenetic signals responsible for the reprogramming process of rTECs into skin stem cells.

EPFL2012

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Non-integrating episomal plasmid-based reprogramming of human amniotic fluid stem cells into induced pluripotent stem cells in chemically defined conditions

Lilia Salimova

Amniotic fluid stem cells (AFSC) represent an attractive potential cell source for fetal and pediatric cell-based therapies. However, upgrading them to pluripotency confers refractoriness toward senescence, higher proliferation rate and unlimited differentiation potential. AFSC were observed to rapidly and efficiently reacquire pluripotency which together with their easy recovery makes them an attractive cell source for reprogramming. The reprogramming process as well as the resulting iPSC epigenome could potentially benefit from the unspecialized nature of AFSC. iPSC derived from AFSC also have potential in disease modeling, such as Down syndrome or -thalassemia. Previous experiments involving AFSC reprogramming have largely relied on integrative vector transgene delivery and undefined serum-containing, feeder-dependent culture. Here, we describe non-integrative oriP/EBNA-1 episomal plasmid-based reprogramming of AFSC into iPSC and culture in fully chemically defined xeno-free conditions represented by vitronectin coating and E8 medium, a system that we found uniquely suited for this purpose. The derived AF-iPSC lines uniformly expressed a set of pluripotency markers Oct3/4, Nanog, Sox2, SSEA-1, SSEA-4, TRA-1-60, TRA-1-81 in a pattern typical for human primed PSC. Additionally, the cells formed teratomas, and were deemed pluripotent by PluriTest, a global expression microarray-based in-silico pluripotency assay. However, we found that the PluriTest scores were borderline, indicating a unique pluripotent signature in the defined condition. In the light of potential future clinical translation of iPSC technology, non-integrating reprogramming and chemically defined culture are more acceptable.

Taylor & Francis Inc2016

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Defined three-dimensional microenvironments boost induction of pluripotency

Massimiliano Caiazzo, Matthias Lütolf, Yuya Okawa, Alessandra Piersigilli, Adrian Ranga, Yoji Tabata

Since the discovery of induced pluripotent stem cells (iPSCs), numerous approaches have been explored to improve the original protocol, which is based on a two-dimensional (2D) cell-culture system. Surprisingly, nothing is known about the effect of a more biologically faithful 3D environment on somatic-cell reprogramming. Here, we report a systematic analysis of how reprogramming of somatic cells occurs within engineered 3D extracellular matrices. By modulating microenvironmental stiffness, degradability and biochemical composition, we have identified a previously unknown role for biophysical effectors in the promotion of iPSC generation. We find that the physical cell confinement imposed by the 3D microenvironment boosts reprogramming through an accelerated mesenchymal-to-epithelial transition and increased epigenetic remodelling. We conclude that 3D microenvironmental signals act synergistically with reprogramming transcription factors to increase somatic plasticity.

Nature Publishing Group2016

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Induced stem cells (iSC) are stem cells derived from somatic, reproductive, pluripotent or other cell types by deliberate epigenetic reprogramming. They are classified as either totipotent (iTC), plur

Cell potency is a cell's ability to differentiate into other cell types. The more cell types a cell can differentiate into, the greater its potency. Potency is also described as the gene activation po

L'épigénétique (mot-valise de épigenèse et génétique) est la discipline de la biologie qui étudie la nature des mécanismes modifiant de manière réversible, transmissible (lors des divisions cellulai

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EPFL2012