Publications de Rouayda Cavin Perier

MGA repository: a curated data resource for ChIP-seq and other genome annotated data

Giovanna Ambrosini, Philipp Bucher, Romain Fernand Pietro Groux, René Dreos, Rouayda Cavin Perier

Oxford University Press2018

The eukaryotic promoter database in its 30th year: focus on non-vertebrate organisms

Giovanna Ambrosini, Philipp Bucher, Romain Fernand Pietro Groux, René Dreos, Rouayda Cavin Perier

We present an update of the Eukaryotic Promoter Database EPD (http://epd.vital-it.ch), more specifically on the EPDnew division, which contains comprehensive organisms-specific transcription start site (TSS) collections automatically derived from next gene ...

2017

The Eukaryotic Promoter Database: expansion of EPDnew and new promoter analysis tools

Giovanna Ambrosini, Philipp Bucher, René Dreos, Rouayda Cavin Perier

We present an update of EPDNew (http://epd. vital-it. ch), a recently introduced new part of the Eukaryotic Promoter Database (EPD) which has been described in more detail in a previous NAR Database Issue. EPD is an old database of experimentally character ...

Oxford University Press2015

EPD and EPDnew, high-quality promoter resources in the next-generation sequencing era

Giovanna Ambrosini, Philipp Bucher, René Dreos, Rouayda Cavin Perier

The Eukaryotic Promoter Database (EPD), available online at http://epd.vital-it.ch, is a collection of experimentally defined eukaryotic POL II promoters which has been maintained for more than 25 years. A promoter is represented by a single position in th ...

Oxford University Press2013