Crypt4GH: a file format standard enabling native access to encrypted data

Publications associées (30)

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Parallel and Scalable Bioinformatics

Stuart Anthony Byma

The field of genomics is likely to become the largest producer of data as a consequence of the large-scale application of next-generation sequencing technology for biological research and personalized medical treatments. The raw sequence data produced by t ...

EPFL2020

Truthful, Transparent and Fair Data Collection Mechanisms

Naman Goel

An important prerequisite for developing trustworthy artificial intelligence is high quality data. Crowdsourcing has emerged as a popular method of data collection in the past few years. However, there is always a concern about the quality of the data thus ...

EPFL2020

Scaling Out Bioinformatics in the Data Center

Sam David Whitlock

Whole Genome Sequencing is a process in the field of bioinformatics that transforms biological samples of DNA into an electronic dataset of genetic bases. The process consists of two sequential components. First, the laboratory process of sequencing transf ...

EPFL2019

Reducing Metadata Leakage from Encrypted Files and Communication with PURBs

Jean-Pierre Hubaux, Bryan Alexander Ford, Ludovic Barman, Kirill Nikitin, Wouter Lueks, Matthew Joshua Underwood

Most encrypted data formats leak metadata via their plaintext headers, such as format version, encryption schemes used, number of recipients who can decrypt the data, and even the recipients’ identities. This leakage can pose security and privacy risks to ...

Sciendo2019

The Fifteenth Data Release of the Sloan Digital Sky Surveys: First Release of MaNGA-derived Quantities, Data Visualization Tools, and Stellar Library

Anand Stéphane Raichoor, Zheng Zheng, Johan Comparat, David Schlegel, John Wilson, Amy Jones, Yuguang Chen, Cheng Li, Guillaume Blanc, Jiayi Sun

Twenty years have passed since first light for the Sloan Digital Sky Survey (SDSS). Here, we release data taken by the fourth phase of SDSS (SDSS-IV) across its first three years of operation (2014 July-2017 July). This is the third data release for SDSS-I ...

2019

Efficient Query Processing for Spatial and Temporal Data Exploration

Eleni Tzirita Zacharatou

Core to many scientific and analytics applications are spatial data capturing the position or shape of objects in space, and time series recording the values of a process over time. Effective analysis of such data requires a shift from confirmatory pipelin ...

EPFL2019

MedChain: Accountable and Auditable Data Sharing in Distributed Medical Scenarios

Jean-Pierre Hubaux, Bryan Alexander Ford, Juan Ramón Troncoso-Pastoriza, Linus Gasser, Jean Louis Raisaro

The current trend towards personalized medicine creates an urgent need to share data among different hospitals and health institutions, which endangers the privacy of the data subjects if not done with the appropriate precautions. Conversely, the frequency ...

2019

Privacy-Enhancing Technologies for Medical and Genomic Data: From Theory to Practice

Jean Louis Raisaro

The impressive technological advances in genomic analysis and the significant drop in the cost of genome sequencing are paving the way to a variety of revolutionary applications in modern healthcare. In particular, the increasing understanding of the human ...

EPFL2018

On Secure Cloud Computing for Genomic Data: From Storage to Analysis

Zhicong Huang

Although privacy is generally considered to be the right of an individual or group to control information about themselves, such a right has become challenging to protect in the digital era, this is exemplified by the case of cloud-based genomic computing. ...

EPFL2018

System and method for providing a collective decentralized authority for sharing sensitive data

Jean-Pierre Hubaux, Bryan Alexander Ford, Jean Louis Raisaro, Zhicong Huang, Patricia Egger

A method of sharing private and/or sensitive data from plurality of data providers to a data user, the data user having a private key and a public key, the method comprising the steps of providing a first data set and encrypting the first data set at a ter ...

2018

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The Fifteenth Data Release of the Sloan Digital Sky Surveys: First Release of MaNGA-derived Quantities, Data Visualization Tools, and Stellar Library

Anand Stéphane Raichoor, Zheng Zheng, Johan Comparat, David Schlegel, John Wilson, Amy Jones, Yuguang Chen, Cheng Li, Guillaume Blanc, Jiayi Sun

2019