Atomic Force Microscopy Stiffness Tomography on Living Arabidopsis thaliana Cells Reveals the Mechanical Properties of Surface and Deep Cell-Wall Layers during Growth

Cell-wall mechanical properties play a key role in the growth and the protection of plants. However, little is known about genuine wall mechanical properties and their growth-related dynamics at subcellular resolution and in living cells. Here, we used atomic force microscopy (AFM) stiffness tomography to explore stiffness distribution in the cell wall of suspension-cultured Arabidopsis thaliana as a model of primary, growing cell wall. For the first time that we know of, this new imaging technique was performed on living single cells of a higher plant, permitting monitoring of the stiffness distribution in cell-wall layers as a function of the depth and its evolution during the different growth phases. The mechanical measurements were correlated with changes in the composition of the cell wall, which were revealed by Fourier-transform infrared (FTIR) spectroscopy. In the beginning and end of cell growth, the average stiffness of the cell wall was low and the wall was mechanically homogenous, whereas in the exponential growth phase, the average wall stiffness increased, with increasing heterogeneity. In this phase, the difference between the superficial and deep wall stiffness was highest. FTIR spectra revealed a relative increase in the polysaccharide/lignin content.

Mechanical and Functional Study of Cell Physiology at the Nanoscale

Pascal Damian Odermatt

By live-cell imaging of biological samples dynamic cellular processes can be resolved. Fluorescence microscopy (FM) and atomic force microscopy (AFM) are both capable of imaging live cells. By combining these techniques structural as well as functional information of the same biological samples are measured. While the dynamics of specific proteins can be imaged by FM, the AFM provides the structural context. To study how intracellular processes affect the mechanics, structure and kinetics of cells at the nanoscale we combined a high-speed AFM (HS-AFM) and an inverted optical microscope (OM) into one instrument. With this system cell physiological processes at different time scales are imaged. Mammalian cell migration happening at minute time scales is studied by correlated super-resolution microscopy and HS-AFM. Bacterial cell separation happening within 10s of milliseconds is characterized as well as bacterial growth over multiple generations. Additionally to imaging, the capability of the AFM to quantitatively measure mechanical properties of tissues is deployed in combination with FM on mouse corneal tissues. Different to most other rod-shaped bacteria where division happens through constriction of the cell wall at midcell, mycobacteria keep the shape of their outer cell envelope unchanged during septation. The septal wall is formed by peptidoglycan branching off from the outer cell envelop eventually splitting the cell into two sister compartments. Nanomechanical measurements show that from the initiation of septation the stiffness at the septum increases significantly. High-temporal resolution imaging of the following bacterial separation process indicated that the sibling cells separate within tens of milliseconds. The connection of the outer cell envelop at the former septum is broken apart suggesting a mechanical break. The timing of the cell separation is regulated by the tensile stress at the septum and the ultimate tensile strength of the cell wall material. The positions where these separations occur are closely associated with morphological features on the undulating cell surface. These features are formed at the poles and migrate towards midcell as the cell grows. Interestingly, sibling cell separation is restricted to the center-most wave-trough making these features the first characteristic associated with division site placement. Experiments with mutant strains show that even asymmetric divisions occur within wave-troughs emphasizing their role in division site placement. Chronic inflammation induces an increase in the stiffness of the corneal tissue and is associated with dramatic changes in the composition of the tissue. Stem cells migrating along this tissue layer of increased stiffness experience increased activation of mechanotransduction pathways. This eventually leads to induction of a skin-like rather than corneal-like character of these regenerating stem cells. It demonstrates that the stiffness of the tissue and thus pathways involved in mechanotransduction decisively influence the stem cell fate.

EPFL2016

Time-lapse high-resolution microscopy to study the morphogenesis of microorganisms

Mélanie Thérèse Marie Hannebelle

Mycobacterium tuberculosis, the etiological agent for the tuberculosis disease, is a bacterial pathogen thought to infect about a quarter of the global human population. It is the first cause of death among infectious diseases, and is most prevalent in low-income populations. Much remains unknown about how these bacteria grow, divide, and manage to persist in the host even during month-long antibiotic treatments. Bacteria are typically at the edge of the spatial resolution that conventional optical microscopy techniques can offer, and so new tools are required to study bacterial substructures or surface morphologies with nanometer resolution. We developed a platform for automated optical microscopy and atomic force microscopy (AFM) in order to study the morphogenesis of mycobacteria. What is the growth dynamics of mycobacteria? Opposite models coexist in the literature for the pole growth dynamics of mycobacteria: the unipolar model and the bipolar model. We show that the growth dynamics of mycobacteria follows a new end take off NETO model. There is a surprising similarity between the NETO growth dynamics of mycobacteria and of fission yeast, which hints at shared mechanisms for pole growth in evolutionarily distant pole growing organisms. How do pole-growing organisms maintain their shape through insertion of new cell wall material at the tip? To explore further pole growth morphogenesis, we developed a method for imaging with AFM the pole of a growing rod-shaped microorganism. We observed the formation of a stiff fibril mesh on the pole of fission yeast cells, and showed that this mesh is stretched as the cell grows and insert new cell wall material at the tip. How do mycobacteria divide into two sibling cells? Another essential aspect of morphogenesis of rod-shaped cell is the division of a mother cell into two sibling cells. Using AFM, we measured the relative contributions of mechanical forces and molecular mechanisms driving the division process in mycobacteria. We showed that there is a concentration of mechanical stress at the future division site, using a combination of COMSOL finite element modeling and AFM measurements while controlling the cell turgor pressure. The accumulation of mechanical stress, in combination of enzymatic activity, ultimately leads to mechanical fracture and separation of the sibling bacteria. Conventional optical microscopy techniques tend to have low resolution and high speed, while conventional AFMs have comparatively high resolution and low speed. We designed and built a 3D-printed structured illumination (SIM) module, the openSIM, as an add-on for fluorescence microscopes. It provides structured illumination to obtain SIM images with higher resolution. With the aim of improving the imaging speed of AFM, we implemented photothermal actuation in a tip-scanning AFM head, and quantified the design constraints for high-speed photothermal off-resonance tapping imaging. AFM is most often used to scan and acquire high-resolution images of a sample. Its nanometer precision make it a unique tool for other applications. We combined an AFM head with a volcano-shaped probe for electrogram measurements, and demonstrated simultaneous recording of extracellular field potentials and contraction of the cell. This new tool opens the way for future studies exploring the intriguing links between mechanobiology and electrophysiology, with single-cell resolution.

EPFL2020

Stiffness Tomography by Atomic Force Microscopy

Giovanni Dietler, Sandor Kasas, Charles Roduit, Serguei Sekatski

The atomic force microscope is a convenient tool to probe living samples at the nanometric scale. Among its numerous capabilities, the instrument can be operated as a namo-indenter to gather information about the mechanical properties of the sample. In this operating mode, the deformation of the cantilever is displayed as a function of the indentation depth of the tip into the sample. Fitting this curve with different theoretical models permits us to estimate the Young's modulus of the sample at the indentation spot. We describe what to our knowledge is a new technique to process these curves to distinguish structures of different stiffness buried into the bulk of the sample. The working principle of this new imaging technique has been verified by finite element models and successfully applied to living cells.