Clinical metagenomic sequencingClinical metagenomic next-generation sequencing (mNGS) is the comprehensive analysis of microbial and host genetic material (DNA or RNA) in clinical samples from patients by next-generation sequencing. It uses the techniques of metagenomics to identify and characterize the genome of bacteria, fungi, parasites, and viruses without the need for a prior knowledge of a specific pathogen directly from clinical specimens.
Massive parallel sequencingMassive parallel sequencing or massively parallel sequencing is any of several high-throughput approaches to DNA sequencing using the concept of massively parallel processing; it is also called next-generation sequencing (NGS) or second-generation sequencing. Some of these technologies emerged between 1993 and 1998 and have been commercially available since 2005. These technologies use miniaturized and parallelized platforms for sequencing of 1 million to 43 billion short reads (50 to 400 bases each) per instrument run.
Sanger sequencingSanger sequencing is a method of DNA sequencing that involves electrophoresis and is based on the random incorporation of chain-terminating dideoxynucleotides by DNA polymerase during in vitro DNA replication. After first being developed by Frederick Sanger and colleagues in 1977, it became the most widely used sequencing method for approximately 40 years. It was first commercialized by Applied Biosystems in 1986. More recently, higher volume Sanger sequencing has been replaced by next generation sequencing methods, especially for large-scale, automated genome analyses.
Séquençage de l'ADNcadre|Résultat du séquençage par la méthode de Sanger. L'ordre de chaque bande indique la position d'un nucléotide A,T,C ou G Le séquençage de l'ADN consiste à déterminer l'ordre d'enchaînement des nucléotides pour un fragment d’ADN donné. La séquence d’ADN contient l’information nécessaire aux êtres vivants pour survivre et se reproduire. Déterminer cette séquence est donc utile aussi bien pour les recherches visant à savoir comment vivent les organismes que pour des sujets appliqués.
Third-generation sequencingThird-generation sequencing (also known as long-read sequencing) is a class of DNA sequencing methods currently under active development. Third generation sequencing technologies have the capability to produce substantially longer reads than second generation sequencing, also known as next-generation sequencing. Such an advantage has critical implications for both genome science and the study of biology in general. However, third generation sequencing data have much higher error rates than previous technologies, which can complicate downstream genome assembly and analysis of the resulting data.
Justice environnementaleLe concept de justice environnementale applique les théories de la justice au champ de l'environnement et de l'écologie. Il découle de la prise en compte de l'environnement et des services écosystémiques qu'il permet comme du « bien commun. » La justice environnementale peut aussi concerner les effets du dérèglement climatique ; dans ce contexte on parle parfois d'injustice et/ou de « justice climatique ».
Science de l'environnementLa science de l'environnement ou science environnementale est une discipline qui intègre les sciences physiques et biologiques telles la physique, la chimie (la biochimie et la chimie de l'environnement), la biologie, l'écologie, la pédologie, la géologie, la géomorphologie, la géographie, la climatologie, l'écologie rétrospective, l'histoire environnementale, etc. afin de mener l'étude de l'environnement.
Racisme environnementalvignette| Des personnes protestent contre la crise de l'eau à Flint, dans le Michigan, qui affecte de manière disproportionnée les personnes de couleur et les communautés à faible revenu. Le racisme environnemental est un concept du mouvement pour la justice environnementale, qui s'est développé aux États-Unis et à l'étranger dans les années 1970 et 1980. Le terme est utilisé pour décrire l'injustice environnementale qui se produit dans un contexte racialisé, tant dans la pratique que dans la politique.
Environmental movementThe environmental movement (sometimes referred to as the ecology movement), is a social movement that aims to protect the natural world from harmful environmental practices in order to create sustainable living. Environmentalists advocate the just and sustainable management of resources and stewardship of the environment through changes in public policy and individual behavior. In its recognition of humanity as a participant in (not an enemy of) ecosystems, the movement is centered on ecology, health, and human rights.
Exome sequencingExome sequencing, also known as whole exome sequencing (WES), is a genomic technique for sequencing all of the protein-coding regions of genes in a genome (known as the exome). It consists of two steps: the first step is to select only the subset of DNA that encodes proteins. These regions are known as exons—humans have about 180,000 exons, constituting about 1% of the human genome, or approximately 30 million base pairs. The second step is to sequence the exonic DNA using any high-throughput DNA sequencing technology.
