Benign synthesis of quinolinecarboxamide ligands, H(2)bqbenzo and H(2)bqb and their Pd(II) complexes: X-ray crystal structure, electrochemical and antibacterial studies

Two carboxamide ligands, H(2)bqbenzo {3,4-bis(2-quinolinecarboxamido)benzophenone} and H(2)bqb {N,N-bis[(2-quinolinecarboxamide)-1,2-benzene]}, have been prepared using tetrabutylammonium bromide as an environmentally benign reaction medium. Two new Pd(II) complexes, [Pd-II(bqbenzo)] (1) and [Pd-II(bqb)] (2), have been synthesized, characterized, and their structures determined by single crystal X-ray diffraction. The di-anionic ligands, bqbenzo(2-) and bqb(2-), are coordinated via two N-amide atoms and the nitrogens of the two quinoline rings, with Pd-N-amide

Lanthanide(II) Complexes Supported by N,O-Donor Tripodal Ligands: Synthesis, Structure, and Ligand-Dependent Redox Behavior

Julie Renée Michelle Andrez, Marinella Mazzanti, Rosario Scopelliti

The preparation and characterization of a series of complexes of the Yb and Eu cations in the oxidation state II and III with the tetradentate N,O-donor tripodal ligands (tris(2-pyridylmethyl)amine (TPA), BPA(-) (HBPA=bis(2-pyridylmethyl)(2-hydroxybenzyl)amine), BPPA(-) (HBPPA=bis(2-pyridylmethyl)(3.5-di-tert-butyl-2-hydroxybenzyl)amine), and MPA(2-) (H(2)MPA=(2-pyridylmethyl)bis(3.5-di-tert-butyl-2-hydroxybenzyl)amine) is reported. The X-ray crystal structures of the heteroleptic Ln(2+) complexes [Ln(TPA)I-2] (Ln=Eu, Yb) and Yb(BPA)I(CH3CN), of the Ln(2+) homoleptic [Ln(TPA)(2)]I-2 (Ln=Sm, Eu, Yb) and [Eu(BPA)(2)] complexes, and of the Ln(3+) [Eu(BPPA)(2)]OTf and [Yb(MPA)(2)K(dme)(2)] (dme=dimethoxyethane) complexes have been determined. Cyclic voltammetry studies carried out on the bis-ligand complexes of Eu3+ and Yb3+ show that the metal center reduction occurs at significantly lower potentials for the BPA(-) ligand as compared with the TPA ligand. This suggests that the more electron-rich character of the BPA(-) ligand results in a higher reducing character of the lanthanide complexes of BPA(-) compared with those of TPA. The important differences in the stability and reactivity of the investigated complexes are probably due to the observed difference in redox potential. Preliminary reactivity studies show that whereas the bis-TPA complexes of Eu2+ and Yb2+ do not show any reactivity with heteroallenes, the [Eu(BPA)(2)] complex reduces CS2 to afford the first example of a lanthanide trithiocarbonate complex.

2015

Picometer Resolution Structure of the Coordination Sphere in the Metal-Binding Site in a Metalloprotein by NMR

Andrea Bertarello, David Lyndon Emsley

Most of our understanding of chemistry derives from atomic-level structures obtained with single-crystal X-ray diffraction. Metal centers in X-ray structures of small organometallic or coordination complexes are often extremely well-defined, with errors in the positions on the order of 10(-4)-10(-5) A. Determining the metal coordination geometry to high accuracy is essential for understanding metal center reactivity, as even small structural changes can dramatically alter the metal activity. In contrast, the resolution of X-ray structures in proteins is limited typically to the order of 10(-1) angstrom. This resolution is often not sufficient to develop precise structure-activity relations for the metal sites in proteins, because the uncertainty in positions can cover all of the known ranges of bond lengths and bond angles for a given type of metal complex. Here we introduce a new approach that enables the determination of a high-definition structure of the active site of a metalloprotein from a powder sample, by combining magic-angle spinning (MAS) nuclear magnetic resonance (NMR) spectroscopy, tailored radio frequency (RF) irradiation schemes, and computational approaches. This allows us to overcome the "blind sphere" in paramagnetic proteins, and to observe and assign H-1, C-13, and N-15 resonances for the ligands directly coordinating the metal center. We illustrate the method by determining the bond lengths in the structure of the Co-II coordination sphere at the core of human superoxide dismutase 1 (SOD) with 0.7 pm precision. The coordination geometry of the resulting structure explains the nonreactive nature of the Co-II/Zn-II centers in these proteins, which allows them to play a purely structural role.

2020

Enantiopure helical (supra)molecular arrays containing lanthanides

Marco Antonio Lama

The diastereoselective synthesis of chiral coordination compounds with d metals proved the effectiveness of the pinene-bipyridine approach in predetermining the chirality at the metal centre. The strong Lewis acidic character of lanthanide cations required the modification of this class of ligands in order to adapt their coordination properties to the binding affinity of Ln(III) toward hard donor atoms like oxygen. The pinene bipyridine carboxylic derivative (+)-L- (figure 1) has been designed and synthesized to form configurationally stable lanthanide complexes. This ligand proved its effectiveness as chiral building block for the synthesis of oligometallic supramolecular structures. Indeed a self-assembly process takes place with complete diastereoselectivity between the enantiomerically pure (-) or (+) L- and Ln(III) ions (Ln = La, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er) in methanol, giving rise to trinuclear enantiopure structures with general formula Ln3(L)6(µ3-OH)(H2O)32 , possessing predetermined helical chirality. The ligands in this case display a new version of supramolecular helical chirality since they are wrapping around a trimetallic core instead of one single metal centre. The same components afford a second polynuclear structure if the reaction is carried out in CH3CN. In this medium a three-dimensional tetranuclear array self-assembles (with general formula Ln4(L)9(µ3-OH)2). The nine ligands are forming three distinct helical domains, two supramolecular as in the case of the trinuclear array and one classical around a single metal centre, with predetermined configuration. The two classes of compounds have been structurally characterized in solid state (X-ray and IR) and in solution (ES-MS, NMR). Their chiroptical properties were investigated by means of Circular Dichroism and Circularly Polarized Luminescence (for the emitting compounds). Trinuclear and tetranuclear arrays are shown to interconvert in CH3CN, in a process mediated by water. This process was rationalized taking into account the nature of the Ln(III) ions, the initial concentration of the components and the addition or removal of water in solution. The availability of both the enantiomers of the ligand prompted us to study the self-recognition capabilities of the two systems. 1H-NMR and CD studies reveal an almost complete chiral recognition in the self-assembly leading to the trinuclear complex. The process leading to tetranuclear species appears instead perturbed, probably due to the higher number of fundamental components involved (4 metals and 9 ligands instead of 3 metals and 6 ligands). Figure 1: Reaction conditions leading to the synthesis of trinuclear and tetranuclear Ln(III) complexes with ligand (+)-L-. The introduction of a carboxylic moiety onto the 6' posititon of the (-)-5,6- and (-)-4,5- pinene bipyridine lead to the tridentate ligands (-)-HL1 and (-)-HL2, respectively. Mononuclear neutral complexes are obtained upon reaction with Ln(ClO4)3. Different extents of diastereoselectivity are pointed out in the two systems by X-ray analysis and CD spectroscopy. In particular the ligand (-)-HL1, in which the pinene moiety is next to the binding site, seems to be more effective in predetermining the configuration at the metal centre. A low diastereoselectivity is instead expressed in the reactions with (-)-HL2 as revealed by the X-ray structure of [Pr{(-)-L2}3] (both Δ and Λ isomers detected) and by the CD spectrum void of signal.

EPFL2006

Enantiopure helical (supra)molecular arrays containing lanthanides

Marco Antonio Lama

EPFL2006