Publication

Homoeolog Inference Methods Requiring Bidirectional Best Hits or Synteny Miss Many Pairs

Publications associées (8)

Cotton yarns decorated with hydrothermally reduced graphene oxide for flexible supercapacitors

Cotton fibers, a natural cellulose, have played a critical role in the development of wearable energy storage, owning to their wearability, integrability, eco-benignity, and cost effectiveness. Graphene, a two-dimensional carbon material, possesses excelle ...

Elsevier2023

Towards automating de novo protein design for novel functionalities: controlling protein folds and protein-protein interactions

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The sheer size of the protein sequence space is massive: a protein of 100 residues can have 20^100 possible sequence combinations; and knowing that this exceeds the number of atoms in the universe, the chance of randomly discovering a stable new sequence w ...

EPFL2022

Statistical physics of interacting proteins: Impact of dataset size and quality assessed in synthetic sequences

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Identifying protein-protein interactions is crucial for a systems-level understanding of the cell. Recently, algorithms based on inverse statistical physics, e.g., direct coupling analysis (DCA), have allowed to use evolutionarily related sequences to addr ...

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Computational methods and modeling of cellular function for the optimization of protein production and the study of cellular disease states

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Systems biology is a multidisciplinary field that weaves together all the basic sciences through the use of computational and bioinformatics tools, to provide a more integrative view of the complex molecular interactions taking place within and among cells ...

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Genomic context analysis reveals dense interaction network between vertebrate ultraconserved non-coding elements

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Motivation: Genomic context analysis, also known as phylogenetic profiling, is widely used to infer functional interactions between proteins but rarely applied to non-coding cis-regulatory DNA elements. We were wondering whether this approach could provide ...

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Real-Time mRNA Measurement during an

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In vitro transcription and translation reactions have become popular for a bottom-up approach to synthetic biology. Concentrations of the mRNA intermediate are rarely determined, although knowledge of synthesis and degradation rates could facilitate ration ...

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Self-Cleaning cotton textiles surfaces modified by photoactive SiO2/TiO2 coating

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The photocatalytic activity of TiO2–SiO2-coated cotton textiles was investigated through the self-cleaning of red wine stains. It was shown that a TiO2–SiO2 species could be produced at temperatures of 100 °C with acceptable photo-activity on non-heat resi ...

2006

Homoeolog Inference Methods Requiring Bidirectional Best Hits or Synteny Miss Many Pairs

Cotton yarns decorated with hydrothermally reduced graphene oxide for flexible supercapacitors

Towards automating de novo protein design for novel functionalities: controlling protein folds and protein-protein interactions

Statistical physics of interacting proteins: Impact of dataset size and quality assessed in synthetic sequences

Computational methods and modeling of cellular function for the optimization of protein production and the study of cellular disease states

Genomic context analysis reveals dense interaction network between vertebrate ultraconserved non-coding elements

Real-Time mRNA Measurement during an

Self-Cleaning cotton textiles surfaces modified by photoactive SiO2/TiO2 coating

Graph Chatbot

Cotton yarns decorated with hydrothermally reduced graphene oxide for flexible supercapacitors

Towards automating de novo protein design for novel functionalities: controlling protein folds and protein-protein interactions

Statistical physics of interacting proteins: Impact of dataset size and quality assessed in synthetic sequences

Computational methods and modeling of cellular function for the optimization of protein production and the study of cellular disease states

Genomic context analysis reveals dense interaction network between vertebrate ultraconserved non-coding elements

Real-Time mRNA Measurement during an

Structure-reactivity relations for DC-magnetron sputtered Cu-layers during E. coli inactivation in the dark and under light

Self-Cleaning cotton textiles surfaces modified by photoactive SiO2/TiO2 coating

Structure-reactivity relations for DC-magnetron sputtered Cu-layers during E. coli inactivation in the dark and under light