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Concept
Hypocotyl
Summary
The hypocotyl (short for "hypocotyledonous stem", meaning "below seed leaf") is the stem of a germinating seedling, found below the cotyledons (seed leaves) and above the radicle (root).
As the plant embryo grows at germination, it sends out a shoot called a radicle that becomes the primary root, and then penetrates down into the soil. After emergence of the radicle, the hypocotyl emerges and lifts the growing tip (usually including the seed coat) above the ground, bearing the embryonic leaves (called cotyledons), and the plumule that gives rise to the first true leaves. The hypocotyl is the primary organ of extension of the young plant and develops into the stem.
The early development of a monocot seedling like cereals and other grasses is somewhat different. A structure called the coleoptile, essentially a part of the cotyledon, protects the young stem and plumule as growth pushes them up through the soil. A mesocotyl—that part of the young plant that lies between the seed (which remains buried) and the plumule—extends the shoot up to the soil surface, where secondary roots develop from just beneath the plumule. The primary root from the radicle may then fail to develop further. The mesocotyl is considered to be partly hypocotyl and partly cotyledon (see seed).
Not all monocots develop like the grasses. The onion develops in a manner similar to the first sequence described above, the seed coat and endosperm (stored food reserve) pulled upwards as the cotyledon extends. Later, the first true leaf grows from the node between the radicle and the sheath-like cotyledon, breaking through the cotyledon to grow past it.
In some plants, the hypocotyl becomes enlarged as a storage organ. Examples include cyclamen, gloxinia and celeriac. In cyclamen this storage organ is called a tuber.
One of the widely used assays in the field of photobiology is the investigation of the effect of changes in light quantity and quality on hypocotyl elongation. It is frequently used to study the growth promoting vs.
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Seedling
A seedling is a young sporophyte developing out of a plant embryo from a seed. Seedling development starts with germination of the seed. A typical young seedling consists of three main parts: the radicle (embryonic root), the hypocotyl (embryonic shoot), and the cotyledons (seed leaves). The two classes of flowering plants (angiosperms) are distinguished by their numbers of seed leaves: monocotyledons (monocots) have one blade-shaped cotyledon, whereas dicotyledons (dicots) possess two round cotyledons.
Plant
Plants are eukaryotes, predominantly photosynthetic, that form the kingdom Plantae. Many are multicellular. Historically, the plant kingdom encompassed all living things that were not animals, and included algae and fungi. All current definitions exclude the fungi and some of the algae. By one definition, plants form the clade Viridiplantae (Latin for "green plants") which consists of the green algae and the embryophytes or land plants. The latter include hornworts, liverworts, mosses, lycophytes, ferns, conifers and other gymnosperms, and flowering plants.
Epicotyl
An epicotyl is important for the beginning stages of a plant's life. It is the region of a seedling stem above the stalks of the seed leaves of an embryo plant. It grows rapidly, showing hypogeal germination, and extends the stem above the soil surface. A common misconception is that the epicotyl, being closer to the apex of the plant, is the first part to emerge after germination - rather, the hypocotyl, the region of the stem between the point of attachment of the cotyledons and the root - forms a hook during hypogeal germination and pushes out of the soil, allowing the more delicate tissues of the plumules and apical meristem to avoid damage from pushing through the soil.