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Related publications (29)

Tomographic reconstruction of the runaway distribution function in TCV using multispectral synchrotron images

Basil Duval, Joan Decker, Umar Sheikh, Artur Perek, Gergely Papp

Synchrotron radiation observed in a quiescent Tokamak a Configuration Variable (TCV) runaway discharge is studied using filtered camera images targeting three distinct wavelength intervals. Through the tomographic simultaneous algebraic reconstruction tech ...

IOP Publishing Ltd2021

Development of the RAPTOR suite of codes towards real-time reconstruction of JET discharges

Federico Alberto Alfredo Felici

The RAPTOR suite of codes combines real-time model-based predictions of the plasma state with the available diagnostic measurements. Following the work on TCV and ASDEX-Upgrade, this paper presents the implementation of the RAPTOR suite for JET. This suite ...

2021

Ultrasound Imaging: From Physical Modeling to Deep Learning

Dimitris Perdios

Among the medical imaging modalities, ultrasound (US) imaging is one of the safest, most widespread, and least expensive method used in medical diagnosis. In the past decades, several technological advances enabled the advent of ultrafast US imaging, an ac ...

EPFL2021

Image reconstruction for novel time domain near infrared optical tomography: towards clinical applications

Edoardo Charbon, Scott Anthony Lindner, Chunmin Zhang, Martin Wolf, Jingjing Jiang

Near infrared optical tomography (NIROT) is an emerging modality that enables imaging the oxygenation of tissue, which is a biomarker of tremendous clinical relevance. Measuring in reflectance is usually required when NIROT is applied in clinical scenarios ...

2020

Multi-CryoGAN: Reconstruction of Continuous Conformations in Cryo-EM Using Generative Adversarial Networks

Michaël Unser, Harshit Gupta, Thanh Hai Phan, Jaejun Yoo

We propose a deep-learning-based reconstruction method for cryo-electron microscopy (Cryo-EM) that can model multiple conformations of a nonrigid biomolecule in a standalone manner. Cryo-EM produces many noisy projections from separate instances of the sam ...

Springer, Cham2020

Reconstruction Methods for Cryo-Electron Microscopy: From Model-based to Data-driven

Laurène Donati

The topic of this thesis is the development of new reconstruction methods for cryo-electron microscopy (cryo-EM). Cryo-EM has revolutionized the field of structural biology over the last decade and now permits the regular discovery of biostructures. Yet, t ...

EPFL2020

Learning approaches to high-fidelity optical diffraction tomography

Joowon Lim

Optical diffraction tomography (ODT) provides us 3D refractive index (RI) distributions of transparent samples. Since RI values differ across different materials, they serve as endogenous contrasts. It, therefore, enables us to image without pre-processing ...

EPFL2020

Three-dimensional tomography of red blood cells using deep learning

Demetri Psaltis, Joowon Lim, Ahmed Ayoub

We accurately reconstruct three-dimensional (3-D) refractive index (RI) distributions from highly ill-posed two-dimensional (2-D) measurements using a deep neural network (DNN). Strong distortions are introduced on reconstructions obtained by the Wolf tran ...

2020

Compressed sensing with signal averaging for improved sensitivity and motion artifact reduction in fluorine-19 MRI

Tobias Kober, Tom Hilbert, Jérôme Yerly, Ruud van Heeswijk, Elena Najdenovska

Fluorine-19 (F-19) MRI of injected perfluorocarbon emulsions (PFCs) allows for the non-invasive quantification of inflammation and cell tracking, but suffers from a low signal-to-noise ratio and extended scan time. To address this limitation, we tested the ...

WILEY2020

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