Publications related to Secondary metabolism

Bioaccumulation and molecular effects of carbamazepine and methylmercury co-exposure in males of Dreissena polymorpha

Florian Frédéric Vincent Breider, Dominique Grandjean, Nguyên Thiên Kim Lê, Claudia Cosio

Dreissena polymorpha is a bivalve promising for biomonitoring in freshwater ecosystems thanks to its abundance and high filtration activity allowing rapid uptake of toxicants and identification of their negative effects. Nonetheless, we still lack knowledg ...

2023

New Approach for the Identification of Isobaric and Isomeric Metabolites

Thomas Rizzo, Ahmed Ben Faleh, Stephan Warnke, Ali H Abikhodr, Teun Van Wieringen

The structural elucidation of metabolite molecules is important in many branches of the life sciences. However, the isomeric and isobaric complexity of metabolites makes their identification extremely challenging, and analytical standards are often require ...

AMER CHEMICAL SOC2023

Coral holobiont cues prime Endozoicomonas for a symbiotic lifestyle

Nils Rädecker, Claudia Isabella Pogoreutz, Gabriela Hannah Holligan Perna

Endozoicomonas are prevalent, abundant bacterial associates of marine animals, including corals. Their role in holobiont health and functioning, however, remains poorly understood. To identify potential interactions within the coral holobiont, we character ...

SPRINGERNATURE2022

NICEpath: Finding metabolic pathways in large networks through atom-conserving substrate-product pairs

Vassily Hatzimanikatis, Jasmin Maria Hafner

Motivation: Finding biosynthetic pathways is essential for metabolic engineering of organisms to produce chemicals, biodegradation prediction of pollutants and drugs, and for the elucidation of bioproduction pathways of secondary metabolites. A key step in ...

OXFORD UNIV PRESS2021

Late post‐natal neurometabolic development in healthy male rats using 1 H and 31 P Magnetic Resonance Spectroscopy

Rolf Gruetter, Cristina Ramona Cudalbu, Dunja Simicic, Veronika Rackayová, Guillaume Donati

Brain metabolism evolves rapidly during early post‐natal development in the rat. While changes in amino acids, energy metabolites, antioxidants or metabolites involved in phospholipid metabolism have been reported in the early stages, neurometabolic change ...

2021

Mitigating the variability of hydrogen production in mixed culture through bioaugmentation with exogenous pure strains

Simon Marius Jean Poirier, Nicolas Bernet

Process stability is a key operational issue when operating dark fermentation with mixed microbial cultures for hydrogen production. This study aimed at mitigating the instability of hydrogen production by separately adding exogenous pure strains suspected ...

PERGAMON-ELSEVIER SCIENCE LTD2020

EXPLORING CHEMODIVERSITY IN METABOLISM TOWARDS THE SUPERVISED INTEGRATION OF CHEMISTRY INTO BIOLOGY

Vassily Hatzimanikatis, Jasmin Maria Hafner, Homa Mohammadi Peyhani, Noushin Hadadi

The availability of different levels of omics data helps us to observe cells with higher resolution and from different perspectives. However, complete understanding of metabolism lags behind in explaining the chemodiversity observed in living organisms – t ...

2017

Exploring chemodiversity in metabolism towards the selective integration of chemistry into biology

Vassily Hatzimanikatis, Jasmin Maria Hafner, Noushin Hadadi

The availability of different levels of omics data helps us to observe cells with higher resolution and from different perspectives. Consequently, the computational exploration of metabolism gained more importance in the last decade to make sense of newly ...

2017

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Secondary metabolism

Bioaccumulation and molecular effects of carbamazepine and methylmercury co-exposure in males of Dreissena polymorpha

New Approach for the Identification of Isobaric and Isomeric Metabolites

Coral holobiont cues prime Endozoicomonas for a symbiotic lifestyle

Phototransformation kinetics of cyanobacterial toxins and secondary metabolites in surface waters

NICEpath: Finding metabolic pathways in large networks through atom-conserving substrate-product pairs

Late post‐natal neurometabolic development in healthy male rats using 1 H and 31 P Magnetic Resonance Spectroscopy

Modeling, predicting and mining metabolism at atom-level resolution

Mitigating the variability of hydrogen production in mixed culture through bioaugmentation with exogenous pure strains

EXPLORING CHEMODIVERSITY IN METABOLISM TOWARDS THE SUPERVISED INTEGRATION OF CHEMISTRY INTO BIOLOGY

Exploring chemodiversity in metabolism towards the selective integration of chemistry into biology

Graph Chatbot

Chat with Graph Search

Bioaccumulation and molecular effects of carbamazepine and methylmercury co-exposure in males of Dreissena polymorpha

Modeling, predicting and mining metabolism at atom-level resolution

Mitigating the variability of hydrogen production in mixed culture through bioaugmentation with exogenous pure strains

New Approach for the Identification of Isobaric and Isomeric Metabolites

Phototransformation kinetics of cyanobacterial toxins and secondary metabolites in surface waters

NICEpath: Finding metabolic pathways in large networks through atom-conserving substrate-product pairs

Late post‐natal neurometabolic development in healthy male rats using 1 H and 31 P Magnetic Resonance Spectroscopy

Coral holobiont cues prime Endozoicomonas for a symbiotic lifestyle

Exploring chemodiversity in metabolism towards the selective integration of chemistry into biology

EXPLORING CHEMODIVERSITY IN METABOLISM TOWARDS THE SUPERVISED INTEGRATION OF CHEMISTRY INTO BIOLOGY