Publications related to Gene expression programming

InterpretCC: Intrinsic User-Centric Interpretability through Global Mixture of Experts

Martin Jaggi, Vinitra Swamy, Jibril Albachir Frej, Julian Thomas Blackwell

Interpretability for neural networks is a trade-off between three key requirements: 1) faithfulness of the explanation (i.e., how perfectly it explains the prediction), 2) understandability of the explanation by humans, and 3) model performance. Most exist ...

2024

Genetic Optimization of Homogeneous Catalysts

Rubén Laplaza Solanas, Simone Gallarati

We present the NaviCatGA package, a versatile genetic algorithm capable of optimizing molecular catalyst structures using well-suited fitness functions to achieve a set of targeted properties. The flexibility and generality of this tool are validated and d ...

2022

Towards ‘Fourth Paradigm’ Spectral Sensing

Marilyne Andersen, Forrest Simon Webler, Manuel Spitschan

Reconstruction algorithms are at the forefront of accessible and compact data collection. In this paper, we present a novel reconstruction algorithm, SpecRA, that adapts based on the relative rarity of a signal compared to previous observations. We leverag ...

2022

Emergence of diauxie as an optimal growth strategy under resource allocation constraints in cellular metabolism

Vassily Hatzimanikatis, Pierre Guy Rémy Salvy

Diauxie, or the sequential consumption of carbohydrates in bacteria such as Escherichia coli, has been hypothesized to be an evolutionary strategy which allows the organism to maximize its instantaneous specific growth-giving the bacterium a competitive ad ...

NATL ACAD SCIENCES2021

A constitutively monomeric UVR8 photoreceptor confers enhanced UV-B photomorphogenesis

Kelvin Ka Ching Lau, Roman Podolec

The plant ultraviolet-B (UV-B) photoreceptor UVR8 plays an important role in UV-B acclimation and survival. UV-B absorption by homodimeric UVR8 induces its monomerization and interaction with the E3 ubiquitin ligase COP1, leading ultimately to gene express ...

NATL ACAD SCIENCES2021

Chromatin three-dimensional interactions mediate genetic effects on gene expression

David Hacker, Giovanna Ambrosini, Philipp Bucher, Sanjeev Kumar

Studying the genetic basis of gene expression and chromatin organization is key to characterizing the effect of genetic variability on the function and structure of the human genome. Here we unravel how genetic variation perturbs gene regulation using a da ...

2019

Analytical Approach for Active Distribution Network Restoration Including Optimal Voltage Regulation

Hossein Sekhavatmanesh

The ever-increasing utilization of sensitive loads in the industrial, commercial, and residential areas in distribution networks requires enhanced reliability and quality of supply. This can be achieved, thanks to self-healing features of smart grids that ...

IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC2019

Heterogeneous combinatorial expression of Hoxd genes in single cells during limb development

Denis Duboule, Marion Leleu, Pierre Raymond Fabre

Background: Global analyses of gene expression during development reveal specific transcription patterns associated with the emergence of various cell types, tissues, and organs. These heterogeneous patterns are instrumental to ensure the proper formation ...

BMC2018

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Gene expression programming

InterpretCC: Intrinsic User-Centric Interpretability through Global Mixture of Experts

Development of a Robotic Microsurgeon for Embryonic Research

Genetic Optimization of Homogeneous Catalysts

Towards ‘Fourth Paradigm’ Spectral Sensing

Emergence of diauxie as an optimal growth strategy under resource allocation constraints in cellular metabolism

A constitutively monomeric UVR8 photoreceptor confers enhanced UV-B photomorphogenesis

Chromatin three-dimensional interactions mediate genetic effects on gene expression

Analytical Approach for Active Distribution Network Restoration Including Optimal Voltage Regulation

Heterogeneous combinatorial expression of Hoxd genes in single cells during limb development

Batch Mode TD(lambda) for Controlling Partially Observable Gene Regulatory Networks

Graph Chatbot

Chat with Graph Search

Development of a Robotic Microsurgeon for Embryonic Research

Genetic Optimization of Homogeneous Catalysts

InterpretCC: Intrinsic User-Centric Interpretability through Global Mixture of Experts

Towards ‘Fourth Paradigm’ Spectral Sensing

A constitutively monomeric UVR8 photoreceptor confers enhanced UV-B photomorphogenesis

Chromatin three-dimensional interactions mediate genetic effects on gene expression

Emergence of diauxie as an optimal growth strategy under resource allocation constraints in cellular metabolism

Analytical Approach for Active Distribution Network Restoration Including Optimal Voltage Regulation

Heterogeneous combinatorial expression of Hoxd genes in single cells during limb development

Batch Mode TD(lambda) for Controlling Partially Observable Gene Regulatory Networks