Related publications (38)

From trees to barcodes and back again II: Combinatorial and probabilistic aspects of a topological inverse problem

Kathryn Hess Bellwald, Lida Kanari, Adélie Eliane Garin

In this paper we consider two aspects of the inverse problem of how to construct merge trees realizing a given barcode. Much of our investigation exploits a recently discovered connection between the symmetric group and barcodes in general position, based ...
2024

Effective field theory of the two Higgs doublet model

Timothy Cohen

We revisit the effective field theory of the two Higgs doublet model at tree level. The introduction of a novel basis in the UV theory allows us to derive matching coefficients in the effective description that resum important contributions from the Higgs ...
SPRINGER2023

From Trees to Barcodes and Back Again:A Combinatorial, Probabilistic and Geometric Study of a Topological Inverse Problem

Adélie Eliane Garin

In this thesis, we investigate the inverse problem of trees and barcodes from a combinatorial, geometric, probabilistic and statistical point of view.Computing the persistent homology of a merge tree yields a barcode B. Reconstructing a tree from B involve ...
EPFL2022

Tree root distribution modelling in different environmental conditions

David Andrew Barry, Paolo Perona, Massimiliano Schwarz

The ability to predict the spatial distribution of tree root system variables (e.g., the Root system Area (RA), the maximum root diameter, the number of roots in diameter classes, the density of fine roots, etc.) under different environmental conditions is ...
2022

Key factors determining the presence of Tree-related Microhabitats: A synthesis of potential factors at site, stand and tree scales, with perspectives for further research

Tree-related microhabitats (TreMs) have been identified as key features for forest-dwelling taxa and are often employed as measures for biodiversity conservation in integrative forest management. However, managing forests to ensure an uninterrupted resourc ...
2022

Genomic and metabolic adaptations of biofilms to ecological windows of opportunity in glacier-fed streams

Tom Ian Battin, Hannes Markus Peter, Susheel Bhanu Busi, Grégoire Marie Octave Edouard Michoud, Leïla Ezzat, Massimo Bourquin, Tyler Joe Kohler, Stylianos Fodelianakis, Paraskevi Pramateftaki, Vincent Henri De Staercke, Matteo Tolosano, Michail Styllas, Martina Andrea Schön

In glacier-fed streams, ecological windows of opportunity allow complex microbial biofilms to develop and transiently form the basis of the food web, thereby controlling key ecosystem processes. Using metagenome-assembled genomes, we unravel strategies tha ...
Springer2022

Metric dimension of critical Galton–Watson trees and linear preferential attachment trees

Gergely Odor

The metric dimension of a graph G is the minimal size of a subset R of vertices of G that, upon reporting their graph distance from a distinguished (source) vertex v⋆, enable unique identification of the source vertex v⋆ among all possible vertices of G. I ...
2021

Scaling Similarity Joins over Tree-Structured Data

Given a large collection of tree-structured objects (e.g., XML documents), the similarity join finds the pairs of objects that are similar to each other, based on a similarity threshold and a tree edit distance measure. The state-of-the-art similarity join ...
Assoc Computing Machinery2015

Distributed Rate Allocation in Inter-Session Network Coding

Pascal Frossard, Nikolaos Thomos, Eirina Bourtsoulatze

In this work, we propose a distributed rate allocation algorithm that minimizes the average decoding delay for multimedia clients in inter-session network coding systems. We consider a scenario where the users are organized in a mesh network and each user ...
Institute of Electrical and Electronics Engineers2014

BF-Tree: Approximate Tree Indexing

Anastasia Ailamaki, Manoussos Gavriil Athanassoulis

The increasing volume of time-based generated data and the shift in storage technologies suggest that we might need to reconsider indexing. Several workloads - like social and service monitoring - often include attributes with implicit clustering because o ...
2014

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