Tree (data structure)

In computer science, a tree is a widely used abstract data type that represents a hierarchical tree structure with a set of connected nodes. Each node in the tree can be connected to many children (depending on the type of tree), but must be connected to exactly one parent, except for the root node, which has no parent (i.e., the root node as the top-most node in the tree hierarchy). These constraints mean there are no cycles or "loops" (no node can be its own ancestor), and also that each child can be treated like the root node of its own subtree, making recursion a useful technique for tree traversal. In contrast to linear data structures, many trees cannot be represented by relationships between neighboring nodes (parent and children nodes of a node under consideration if they exists) in a single straight line (called edge or link between two adjacent nodes). Binary trees are a commonly used type, which constrain the number of children for each parent to at most two. When the orde

Yu Tang

Given a large collection of tree-structured objects (e.g., XML documents), the similarity join finds the pairs of objects that are similar to each other, based on a similarity threshold and a tree edit distance measure. The state-of-the-art similarity join methods compare simpler approximations of the objects (e.g., strings), in order to prune pairs that cannot be part of the similarity join result based on distance bounds derived by the approximations. In this paper, we propose a novel similarity join approach, which is based on the dynamic decomposition of the tree objects into subgraphs, according to the similarity threshold. Our technique avoids computing the exact distance between two tree objects, if the objects do not share at least one common subgraph. In order to scale up the join, the computed subgraphs are managed in a two-layer index. Our experimental results on real and synthetic data collections show that our approach outperforms the state-of-the-art methods by up to an order of magnitude.

Assoc Computing Machinery2015

Ideal Hash Trees

Hash Trees with nearly ideal characteristics are described. These Hash Trees require no initial root hash table yet are faster and use significantly less space than chained or double hash trees. Insert, search and delete times are small and constant, independent of key set size, operations are O(1). Small worst-case times for insert, search and removal operations can be guaranteed and misses cost less than successful searches. Array Mapped Tries(AMT), first described in Fast and Space Efficient Trie Searches, Bagwell [2000], form the underlying data structure. The concept is then applied to external disk or distributed storage to obtain an algorithm that achieves single access searches, close to single access inserts and greater than 80 percent disk block load factors. Comparisons are made with Linear Hashing, Litwin, Neimat, and Schneider [1993] and B-Trees, R.Bayer and E.M.McCreight [1972]. In addition two further applications of AMTs are briefly described, namely, Class/Selector dispatch tables and IP Routing tables. Each of the algorithms has a performance and space usage that is comparable to contemporary implementations but simpler.

2001

Sketches, metrics and fast algorithms

Navid Nouri

As it has become easier and cheaper to collect big datasets in the last few decades, designing efficient and low-cost algorithms for these datasets has attracted unprecedented attention. However, in most applications, even storing datasets as acquired has become extremely costly and inefficient, which motivates the study of sublinear algorithms. This thesis focuses on studying two fundamental graph problems in the sublinear regime. Furthermore, it presents a fast kernel density estimation algorithm and data structure. The first part of this thesis focuses on graph spectral sparsification in dynamic streams. Our algorithm achieves almost optimal runtime and space simultaneously in a single pass. Our method is based on a novel bucketing scheme that enables us to recover high effective resistance edges faster. This contribution presents a novel approach to the effective resistance embedding of the graph, using locality-sensitive hash functions, with possible further future applications.The second part of this thesis presents spanner construction results in the dynamic streams and the simultaneous communication models. First, we show how one can construct a

\tilde{O}(n^{2/3})

-spanner using the above-mentioned almost-optimal single-pass spectral sparsifier, resulting in the first single-pass algorithm for non-trivial spanner construction in the literature. Then, we generalize this result to constructing

\tilde{O}(n^{2/3(1-\alpha)})

-spanners using

\tilde{O}(n^{1+\alpha})

space for any

\alpha \in [0,1]

, providing a smooth trade-off between distortion and memory complexity. Moreover, we study the simultaneous communication model and propose a novel protocol with low per player information. Also, we show how one can leverage more rounds of communication in this setting to achieve better distortion guarantees. Finally, in the third part of this thesis, we study the kernel density estimation problem. In this problem, given a kernel function, an input dataset imposes a kernel density on the space. The goal is to design fast and memory-efficient data structures that can output approximations to the kernel density at queried points. This thesis presents a data structure based on the classical near neighbor search and locality-sensitive hashing techniques that improves or matches the query time and space complexity for radial kernels considered in the literature. The approach is based on an implementation of (approximate) importance sampling for each distance range and then using near neighbor search algorithms to recover points from these distance ranges. Later, we show how to improve the runtime, using recent advances in the data-dependent near neighbor search data structures, for a class of radial kernels that includes the Gaussian kernel.

EPFL2022

Sketches, metrics and fast algorithms

Navid Nouri

\tilde{O}(n^{2/3})

\tilde{O}(n^{2/3(1-\alpha)})

-spanners using

\tilde{O}(n^{1+\alpha})

space for any

\alpha \in [0,1]

EPFL2022

Scaling Similarity Joins over Tree-Structured Data

Ideal Hash Trees

Sketches, metrics and fast algorithms

Sketches, metrics and fast algorithms

Scaling Similarity Joins over Tree-Structured Data

Ideal Hash Trees