Concept

Homology modeling

Related publications (116)

3D Solid Texture Classification Using Locally-Oriented Wavelet Transforms

Many image acquisition techniques used in biomedical imaging, material analysis, and structural geology are capable of acquiring 3D solid images. Computational analysis of these images is complex but necessary, since it is difficult for humans to visualize ...

IEEE2017

Two-Dimensional Folding of Polypeptides into Molecular Nanostructures at Surfaces

Klaus Kern, Stephan Rauschenbach, Sabine Abb, Gordon Rinke

Herein we report the fabrication of molecular nanostructures on surfaces via two-dimensional (2D) folding of the nine amino acid peptide bradykinin. Soft-landing electrospray ion beam deposition in conjunction with high-resolution imaging by scanning tunne ...

Amer Chemical Soc2017

Modeling of Sustainable Base Production by Microbial Electrolysis Cell

Christos Comninellis, Fabian Fischer, Marc Sugnaux, Maxime Blatter

A predictive model for the microbial/electrochemical base formation from wastewater was established and compared to experimental conditions within a microbial electrolysis cell. A Na2SO4/K2SO4 anolyte showed that model prediction matched experimental resul ...

Wiley-V C H Verlag Gmbh2016

Network Alignment: Theory, Algorithms, and Applications

Ehsan Kazemi

Networks are central in the modeling and analysis of many large-scale human and technical systems, and they have applications in diverse fields such as computer science, biology, social sciences, and economics. Recently, network mining has been an active a ...

EPFL2016

PROPER: global protein interaction network alignment through percolation matching

Matthias Grossglauser, Seyed Hamed Hassani, Ehsan Kazemi, Hasan Pezeshgi Modarres

Background The alignment of protein-protein interaction (PPI) networks enables us to uncover the relationships between different species, which leads to a deeper understanding of biological systems. Network alignment can be used to transfer biological know ...

2016

Social LSTM: Human Trajectory Prediction in Crowded Spaces

Alexandre Massoud Alahi, Vignesh Ramanathan

Pedestrians follow different trajectories to avoid obstacles and accommodate fellow pedestrians. Any autonomous vehicle navigating such a scene should be able to foresee the future positions of pedestrians and accordingly adjust its path to avoid collision ...

IEEE2016

On-chip mesoporous functionalized magnetic microspheres for protein sequencing by extended bottom-up mass spectrometry

Hubert Girault, Yury Tsybin, Natalia Gasilova, Liang Qiao, Kristina Srzentic

Limited amount and extreme concentration variability of proteomic-related samples require efficient analyte preconcentration and purification prior to the mass spectrometry (MS)-based analysis. Preferably, these steps should be coupled on-line with chosen ...

American Chemical Society2016

KAT2A/KAT2B-targeted acetylome reveals a role for PLK4 acetylation in preventing centrosome amplification

Pierre Gönczy, Mathias Fournier

Lysine acetylation is a widespread post-translational modification regulating various biological processes. To characterize cellular functions of the human lysine acetyltransferases KAT2A (GCN5) and KAT2B (PCAF), we determined their acetylome by shotgun pr ...

2016

Differential Dimerization of Variants Linked to Enhanced S-Cone Sensitivity Syndrome (ESCS) Located in the NR2E3 Ligand-Binding Domain

Nicolas Jean Philippe Guex, Pascal Escher

NR2E3 encodes the photoreceptor-specific nuclear hormone receptor that acts as a repressor of cone-specific gene expression in rod photoreceptors, and as an activator of several rod-specific genes. Recessive variants located in the ligand-binding domain (L ...

Wiley-Blackwell2015

A Modulated Closed Form solution for Quantitative Susceptibility Mapping - A thorough evaluation and comparison to iterative methods based on edge prior knowledge

Rolf Gruetter, Yves Wiaux, José Pedro Rebelo Ferreira Marques, Diana Khabipova

The aim of this study is to perform a thorough comparison of quantitative susceptibility mapping (QSM) techniques and their dependence on the assumptions made. The compared methodologies were: two iterative single orientation methodologies minimizing the l ...

Elsevier2015

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