Concept

Aerobic organism

Related publications (32)

The influence of the crowding assumptions in biofilm simulations

Vassily Hatzimanikatis, Liliana Angeles Martinez

Author summary In nature, many organisms grow in crowded biofilms that protect against stressful conditions, making their control/eradication a challenge. Modeling these microbial systems is a valuable tool for studying the interactions among cells and exp ...

PUBLIC LIBRARY SCIENCE2021

Comparative RNA-Seq analyses ofDrosophilaplasmatocytes reveal gene specific signatures in response to clean injury and septic injury

Bruno Lemaitre, Jan Paul Dudzic, Elodie Julie Virginie Ramond

Drosophila melanogaster's blood cells (hemocytes) play essential roles in wound healing and are involved in clearing microbial infections. Here, we report the transcriptional changes of larval plasmatocytes after clean injury or infection with the Gram-neg ...

PUBLIC LIBRARY SCIENCE2020

Recent advances on sputtered films with Cu in ppm concentrations leading to an acceleration of the bacterial inactivation

Juan Kiwi, Sami Rtimi

This review focuses on the acceleration of the bactericidal and fungicidal effects by uniform, adhesive Cu-based nanocomposites on textile and thin polymer surfaces. The acceleration of the bacterial inactivation kinetics mediated by Cu, TiO2/Cu and ZrO2-T ...

ELSEVIER2020

A cellulolytic fungal biofilm enhances the consolidated bioconversion of cellulose to short chain fatty acids by the rumen microbiome

Robert Lawrence Shahab

The ability of the multispecies biofilm membrane reactors (MBM reactors) to provide distinguished niches for aerobic and anaerobic microbes at the same time was used for the investigation of the consolidated bioprocessing of cellulose to short chain fatty ...

2019

Computational studies of industrial hosts for improved production of the 2nd generation of biofuels

Milenko Tokic

In an effort of overcoming the limited availability of fossil energy resources and moving toward a sustainable economy, the focus of the research and development in the area of biofuels has shifted towards developing the 2nd generation of fuels that should ...

EPFL2019

Impact of iron reduction on the metabolism of Clostridium acetobutylicum

Vassily Hatzimanikatis, Karin Lederballe Meibom, Zhaleh Hosseini, Cornelia List

Iron is essential for most living organisms. In addition, its biogeochemical cycling influences important processes in the geosphere (e.g., the mobilization or immobilization of trace elements and contaminants). The reduction of Fe(III) to Fe(II) can be ca ...

2019

A Design-Build-Test cycle using modeling and experiments reveals interdependencies between upper glycolysis and xylose uptake in recombinant S. cerevisiae and improves predictive capabilities of large-scale kinetic models

Vassily Hatzimanikatis, Ljubisa Miskovic, Keng Cher Soh

Recent advancements in omics measurement technologies have led to an ever-increasing amount of available experimental data that necessitate systems-oriented methodologies for efficient and systematic integration of data into consistent large-scale kinetic ...

2017

Effect of light and oxygen on repetitive bacterial inactivation on uniform, adhesive, robust and stable Cu-polyester surfaces

César Pulgarin, Juan Kiwi, Sami Rtimi, Rosendo Sanjines

This study reports new findings on the sputtered Cu-polyester (Cu-PES) bacterial inactivation under low intensity visible light (lambda > 400 nm). Cu-PES samples sputtered for 160 s led to the complete inactivation of E. coli in anaerobic and aerobic media ...

De Gruyter Mouton2017

Insight on the photocatalytic bacterial inactivation by co-sputtered TiO2-Cu in aerobic and anaerobic conditions

César Pulgarin, Juan Kiwi, Michaël Bensimon, Sami Rtimi, Rosendo Sanjines, Stefanos Giannakis

Co-sputtered TiO2-Cu polyester (TiO2-Cu-PES) under actinic light induced bacterial reduction of E. coli in the presence of O2 (air) and under anaerobic conditions. The bacterial inactivation/oxidation proceeds in the absence of O2 (air) probably due to the ...

Elsevier2016

New evidence for Cu-decorated binary-oxides mediating bacterial inactivation/mineralization in aerobic media

César Pulgarin, Juan Kiwi, Michaël Bensimon, Sami Rtimi

Binary oxide semiconductors TiO2-ZrO2 and Cu-decorated TiO2-ZrO2 (TiO2-ZrO2-Cu) uniform films were sputtered on polyester (PES). These films were irradiated under low intensity solar simulated light and led to bacterial inactivation in aerobic and anaerobi ...

Elsevier2016

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