Publications by Ahmed Bassam Sayed Ayoub Mohamed Emam

Loss Minimized Data Reduction in Single-Cell Tomographic Phase Microscopy Using 3D Zernike Descriptors

Demetri Psaltis, Ahmed Bassam Sayed Ayoub Mohamed Emam

Tomographic phase microscopy (TPM) in flow cytometry is one of the most promising computational imaging techniques for the quantitative 3-dimensional (3D) analysis of unstained single cells. Continuous cells' flow, combined with the stain-free mode, can as ...

AMER ASSOC ADVANCEMENT SCIENCE2023

Advanced Techniques in Optical Diffraction Tomography

Ahmed Bassam Sayed Ayoub Mohamed Emam

In this thesis, we study the 3 challenges described above. First, we study different reconstruction techniques and assess the fidelity of each reconstruction results by means of structured illumination and phase conjugation. By reconstructing the 3D refrac ...

EPFL2022

Fluorescence-Based and Fluorescent Label-Free Characterization of Polymer Nanoparticle Decorated T Cells

Demetri Psaltis, Harm-Anton Klok, Tanja Thomsen, Ahmed Bassam Sayed Ayoub Mohamed Emam

Cells are attractive carriers for the transport and delivery of nanoparticulate cargo. The use of cell-based carriers allows one to enhance control over the biodistribution of drug-loaded polymers and polymer nanoparticles. One key element in the developme ...

American Chemical Society2021

Adaptive Regularization For Three-Dimensional Optical Diffraction Tomography

Michaël Unser, Demetri Psaltis, Thanh-An Michel Pham, Emmanuel Emilien Louis Soubies, Ahmed Ayoub, Ahmed Bassam Sayed Ayoub Mohamed Emam

Optical diffraction tomography (ODT) allows one to quantitatively measure the distribution of the refractive index of the sample. It relies on the resolution of an inverse scattering problem. Due to the limited range of views as well as optical aberrations ...

IEEE2020

Three-Dimensional Optical Diffraction Tomography With Lippmann-Schwinger Model

Michaël Unser, Demetri Psaltis, Thanh-An Michel Pham, Emmanuel Emilien Louis Soubies, Joowon Lim, Ahmed Ayoub, Ahmed Bassam Sayed Ayoub Mohamed Emam

A broad class of imaging modalities involve the resolution of an inverse-scattering problem. Among them, three-dimensional optical diffraction tomography (ODT) comes with its own challenges. These include a limited range of views, a large size of the sampl ...

2020