Publication
A study of accuracy and precision in oligonucleotide arrays: extracting more signal at large concentrations
Related concepts (34)
DNA microarray
A DNA microarray (also commonly known as DNA chip or biochip) is a collection of microscopic DNA spots attached to a solid surface. Scientists use DNA microarrays to measure the expression levels of large numbers of genes simultaneously or to genotype multiple regions of a genome. Each DNA spot contains picomoles (10−12 moles) of a specific DNA sequence, known as probes (or reporters or oligos). These can be a short section of a gene or other DNA element that are used to hybridize a cDNA or cRNA (also called anti-sense RNA) sample (called target) under high-stringency conditions.
Gene expression
Gene expression is the process by which information from a gene is used in the synthesis of a functional gene product that enables it to produce end products, proteins or non-coding RNA, and ultimately affect a phenotype. These products are often proteins, but in non-protein-coding genes such as transfer RNA (tRNA) and small nuclear RNA (snRNA), the product is a functional non-coding RNA.
Dachau concentration camp
Dachau (ˈdæxaʊ, -kaʊ; ˈdɑːxaʊ, -kaʊ) was one of the first concentration camps built by Nazi Germany and the longest running one, opening on 22 March 1933. The camp was initially intended to intern Hitler's political opponents, which consisted of communists, social democrats, and other dissidents. It is located on the grounds of an abandoned munitions factory northeast of the medieval town of Dachau, about northwest of Munich in the state of Bavaria, in southern Germany.
Transcriptomics technologies
Transcriptomics technologies are the techniques used to study an organism's transcriptome, the sum of all of its RNA transcripts. The information content of an organism is recorded in the DNA of its genome and expressed through transcription. Here, mRNA serves as a transient intermediary molecule in the information network, whilst non-coding RNAs perform additional diverse functions. A transcriptome captures a snapshot in time of the total transcripts present in a cell.
Gene expression profiling
In the field of molecular biology, gene expression profiling is the measurement of the activity (the expression) of thousands of genes at once, to create a global picture of cellular function. These profiles can, for example, distinguish between cells that are actively dividing, or show how the cells react to a particular treatment. Many experiments of this sort measure an entire genome simultaneously, that is, every gene present in a particular cell. Several transcriptomics technologies can be used to generate the necessary data to analyse.
High throughput biology
High throughput biology (or high throughput cell biology) is the use of automation equipment with classical cell biology techniques to address biological questions that are otherwise unattainable using conventional methods. It may incorporate techniques from optics, chemistry, biology or to permit rapid, highly parallel research into how cells function, interact with each other and how pathogens exploit them in disease. High throughput cell biology has many definitions, but is most commonly defined by the search for active compounds in natural materials like in medicinal plants.
Concentration
In chemistry, concentration is the abundance of a constituent divided by the total volume of a mixture. Several types of mathematical description can be distinguished: mass concentration, molar concentration, number concentration, and volume concentration. The concentration can refer to any kind of chemical mixture, but most frequently refers to solutes and solvents in solutions. The molar (amount) concentration has variants, such as normal concentration and osmotic concentration. Dilution is reduction of concentration, e.
Nazi concentration camps
From 1933 to 1945, Nazi Germany operated more than a thousand concentration camps (Konzentrationslager), including subcamps on its own territory and in parts of German-occupied Europe. The first camps were established in March 1933 immediately after Adolf Hitler became Chancellor of Germany. Following the 1934 purge of the SA, the concentration camps were run exclusively by the SS via the Concentration Camps Inspectorate and later the SS Main Economic and Administrative Office.
Flossenbürg concentration camp
Flossenbürg was a Nazi concentration camp built in May 1938 by the SS Main Economic and Administrative Office. Unlike other concentration camps, it was located in a remote area, in the Fichtel Mountains of Bavaria, adjacent to the town of Flossenbürg and near the German border with Czechoslovakia. The camp's initial purpose was to exploit the forced labor of prisoners for the production of granite for Nazi architecture. In 1943, the bulk of prisoners switched to producing Messerschmitt Bf 109 fighter planes and other armaments for Germany's war effort.
Regulation of gene expression
Regulation of gene expression, or gene regulation, includes a wide range of mechanisms that are used by cells to increase or decrease the production of specific gene products (protein or RNA). Sophisticated programs of gene expression are widely observed in biology, for example to trigger developmental pathways, respond to environmental stimuli, or adapt to new food sources. Virtually any step of gene expression can be modulated, from transcriptional initiation, to RNA processing, and to the post-translational modification of a protein.