An Exact Algorithm to Compute the Double-Cut-and-Join Distance for Genomes with Duplicate Genes
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In the field of robust optimization, the goal is to provide solutions to combinatorial problems that hedge against variations of the numerical parameters. This constitutes an effort to design algorithms that are applicable in the presence of uncertainty in ...
Group-based sparsity models are proven instrumental in linear regression problems for recovering signals from much fewer measurements than standard compressive sensing. A promise of these models is to lead to “interpretable” signals for which we identify i ...
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Recent advancements in DNA sequencing technologies, accompanied by parallel development of sophisticated computational methods, offer an unprecedented opportunity to explore and study the genetic material of many organisms. However, despite the tremendous ...
Given a schema and a set of concepts, representative of entities in the domain of discourse, schema cover defines correspondences between concepts and parts of the schema. Schema cover aims at interpreting the schema in terms of concepts and thus, vastly si ...
One of the classic results in scheduling theory is the 2-approximation algorithm by Lenstra, Shmoys, and Tardos for the problem of scheduling jobs to minimize makespan on unrelated machines; i.e., job j requires time p(ij) if processed on machine i. More t ...
In this paper we consider a linear system represented by subsystems coupled through states and propose a distributed control scheme for guaranteeing asymptotic stability and satisfaction of constraints on system inputs and states. Our design procedure enab ...
Computing the edit distance between two genomes is a basic problem in the study of genome evolution. The double-cut-and-join (DCJ) model has formed the basis for most algorithmic research on rearrangements over the last few years. The edit distance under t ...
Computing the edit distance between two genomes under certain operations is a basic problem in the study of genome evolution. The double-cut-and-join (DCJ) model has formed the basis for most algorithmic research on rearrangements over the last few years. ...