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PIRACY: An Optimized Pipeline for Functional Connectivity Analysis in the Rat Brain

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QuNex-An integrative platform for reproducible neuroimaging analytics

Valerio Zerbi

IntroductionNeuroimaging technology has experienced explosive growth and transformed the study of neural mechanisms across health and disease. However, given the diversity of sophisticated tools for handling neuroimaging data, the field faces challenges in ...

FRONTIERS MEDIA SA2023

IntroductionDiffusion-weighted magnetic resonance spectroscopy (DW-MRS) offers improved cellular specificity to microstructure-compared to water-based methods alone-but spatial resolution and SNR is severely reduced and slow-diffusing metabolites necessita ...

Lausanne2023

Background: Functional connectivity quantifies the statistical dependencies between the activity of brain regions, measured using neuroimaging data such as functional magnetic resonance imaging (fMRI) blood-oxygenation-level dependent time series. The netw ...

MARY ANN LIEBERT, INC2022

Large-scale brain network dynamics in very preterm children and relationship with socio-emotional outcomes: an exploratory study

Dimitri Nestor Alice Van De Ville, Vanessa Siffredi, Younes Farouj, Daniel Mourad Alfy Ramzy Tadros

Background Children born very preterm (VPT;

SPRINGERNATURE2022

Boosting Efficiency of External Pipelines by Blurring Application Boundaries

Anastasia Ailamaki, Periklis Chrysogelos, Anna Patricia Herlihy

Modern application development addresses increasingly specialized problems using domain-specific utilities, such as Optical Code Recognition and standalone statistical tools. The diversity of tooling, combined with the ever-growing volume of data, requires ...

2022

The relationship between EEG and fMRI connectomes is reproducible across simultaneous EEG-fMRI studies from 1.5T to 7T

Rolf Gruetter, João Pedro Forjaco Jorge, Arwen Blanche Giraud, François Lazeyras, Giannina Rita Iannotti

Both electroencephalography (EEG) and functional Magnetic Resonance Imaging (fMRI) are non-invasive methods that show complementary aspects of human brain activity. Despite measuring different proxies of brain activity, both the measured blood-oxygenation ...

2021

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Individual characterization of subjects based on their functional connectome (FC), termed “FC fingerprinting”, has become a highly sought-after goal in contemporary neuroscience research. Recent functional magnetic resonance imaging (fMRI) studies have dem ...

2021

Brain networks are complex dynamical systems in which directed interactions between different areas evolve at the sub-second scale of sensory, cognitive and motor processes. Due to the highly non-stationary nature of neural signals and their unknown noise ...

2020

The synchronized firing of distant neuronal populations gives rise to a wide array of functional brain networks that underlie human brain function. Given the enormous perception, learning, and cognition potential of the human brain, it is not surprising th ...

EPFL2020

Dynamics Of Brain Activity Captured By Graph Signal Processing Of Neuroimaging Data To Predict Human Behaviour

Dimitri Nestor Alice Van De Ville, Thomas William Arthur Bolton

Joint structural and functional modelling of the brain based on multimodal imaging increasingly show potential in elucidating the underpinnings of human cognition. In the graph signal processing (GSP) approach for neuroimaging, brain activity patterns are ...

IEEE2020