Géométrie moléculaire bipyramidale trigonale

In chemistry, a trigonal bipyramid formation is a molecular geometry with one atom at the center and 5 more atoms at the corners of a triangular bipyramid. This is one geometry for which the bond angles surrounding the central atom are not identical (see also pentagonal bipyramid), because there is no geometrical arrangement with five terminal atoms in equivalent positions. Examples of this molecular geometry are phosphorus pentafluoride (), and phosphorus pentachloride () in the gas phase. The five atoms bonded to the central atom are not all equivalent, and two different types of position are defined. For phosphorus pentachloride as an example, the phosphorus atom shares a plane with three chlorine atoms at 120° angles to each other in equatorial positions, and two more chlorine atoms above and below the plane (axial or apical positions). According to the VSEPR theory of molecular geometry, an axial position is more crowded because an axial atom has three neighboring equatorial atoms (on the same central atom) at a 90° bond angle, whereas an equatorial atom has only two neighboring axial atoms at a 90° bond angle. For molecules with five identical ligands, the axial bond lengths tend to be longer because the ligand atom cannot approach the central atom as closely. As examples, in PF5 the axial P−F bond length is 158 pm and the equatorial is 152 pm, and in PCl5 the axial and equatorial are 214 and 202 pm respectively. In the mixed halide PF3Cl2 the chlorines occupy two of the equatorial positions, indicating that fluorine has a greater apicophilicity or tendency to occupy an axial position. In general ligand apicophilicity increases with electronegativity and also with pi-electron withdrawing ability, as in the sequence Cl < F < CN. Both factors decrease electron density in the bonding region near the central atom so that crowding in the axial position is less important. The VSEPR theory also predicts that substitution of a ligand at a central atom by a lone pair of valence electrons leaves the general form of the electron arrangement unchanged with the lone pair now occupying one position.

Scanning Tunneling Microscopy for Molecules: Effects of Electron Propagation into Vacuum

Klaus Kern, Abhishek Grewal

Using scanning tunneling microscopy (STM), we experimentally and theoretically investigate isolated platinum phthalocyanine (PtPc) molecules adsorbed on an atomically thin NaCl(100) film vapor deposited on Au(111). We obtain good agreement between theory a ...

Amer Chemical Soc2024

Mechanistic Insight into Supramolecular Polymerization in Water Tunable by Molecular Geometry

Lukas Pfeifer, Fan Xu

Supramolecular self-assembly in water based on non-covalent bonding is attracting major attention due to the potential of hydrogels and aqueous polymers in biomedical applications. Although supramolecular polymerization in organic solvents is well establis ...

CHINESE CHEMICAL SOC2022

Enhanced Intersystem Crossing and Transient Electron Spin Polarization in a Photoexcited Pentacene–Trityl Radical

David Lyndon Emsley, Jacques-Edouard Moser, Aaron James Rossini, Dominik Józef Kubicki, Moreno Lelli, Etienne Christophe Socie, Gabriele Stevanato, Claudia Esther Avalos

Identifying and characterizing systems that generate well-defined states with large electron spin polarization is of high interest for applications in molecular spintronics, high-energy physics, and magnetic resonance spectroscopy. The generation of electr ...

2020