Image Coding of 3D Volume Using Wavelet Transform for Fast Retrieval of 2D Images

An encoder/decoder system for 3D volumetric medical data is proposed. The system allows fast access to any 2D image by decoding only the relevant information from each subband image and thus provides minimum decoding time. This will be of immense use for the medical community because most of the computerised tomography, magnetic resonance imaging and positron emission tomography modalities produce volumetric data. As a fully fledged 3D wavelet transform is used for compression, the advantage of good compression ratio is preserved. Preprocessing is carried out prior to wavelet transform, to enable easier identification of coefficients from each subband image. Inclusion of special characters in the bit stream (markers) facilitates access to corresponding information from the encoded data. Experiments are carried out by performing Daub4 filter along x (row) and y (column) directions and Haar filter along the z (slice) direction to account for the difference between interslice and intraslice resolution. The performance of the system has been evaluated on four sets of volumetric data and the results are compared to other 3D encoding/2D decoding schemes. Results show that for slice spacing of 3–10 mm, there is substantial improvement in decoding time. The speedup is found to be 2.

Wavelet Transform Codec for Fast Retrieval of Slices of 3D objects

Vijayaraghavan Thirumalai

We propose a method to encode a 3D magnetic resonance image data and a decoder in such way that fast access to any 2D image is possible by decoding only the corresponding information from each subband image and thus provides minimum decoding time. This will be of immense use for medical community, because most of PET and MRI data are volumeric data. Preprocessing is carried out at every level before wavelet transformation to enable easier identification of coefficients from each subband image. Inclusion of special characters in the bit stream facilitates access to corresponding information from the encoded data. Results are taken by performing Daub4 along x (row), y (column) direction and Haar along z (slice) direction. Comparable results are achieved with the existing technique. In addition to that decoding time is reduced by 1.98 times. Arithmetic coding is used to encode every corresponding information independently.

2005

Exploitation de connaissances sémantiques externes dans les représentations vectorielles en recherche documentaire

Florian Seydoux

The work presented in this thesis deals with several problems met in information retrieval (IR), task which one can summarise as identifying, in a collection of "documents", a subset of documents carrying a sought information, i.e.. relevant for a request expressed by a user. In the case of textual documents, to which we limited ourselves within the framework of this thesis, a significant part of the difficulty lies in ambiguity inherent to human languages. The interaction with the user is also approached in our work, by studying a tool enabling a natural language access to a database. Finally, some techniques which permit the visualisation of large collections of documents are also presented. In this document we first of all describe the principal models of IR by highlighting the relations which exist with some manual technics of IR and document retrieval, developed during the past centuries. We present the principle of document indexing, allowing us to represent documents in a multidimensional space, and the use of this representation by a vectorial model. After having reviewed the principal improvements made these last years with vectorial research systems, including the preprocessings of collections, the indexing mechanism and measurements of similarities between documents, we detail some recent usecases of additional semantic resources (semantic dictionaries, thesaurus, networks, ontologies) reported in scientific literature for the indexing task. We then present more in detail the semantic indexing principle of textual documents by using a thesaurus, consisting in integrating in the document's representation space at least part of the informational contents of hierarchical semantic resources. We propose a general framework allowing us to describe and position various possible techniques to carry out the semantic indexing by adapting, if possible, the specificity of the descriptions resulting from the semantic resources to the data to be represented. We use this framework to describe three families of criteria usable for semantic indexing, each one having its own characteristics. For each of these families, we give the specific algorithms allowing the computation of the criteria. The first two families allow us to consider several criteria already known in feature selection. Moreover we show that, unfortunately, many of these criteria are in fact not very effective for the considered task. The third family allows us to introduce a completely new criterion, the Minimum Redundancy Cut criterion (MRC), built on the basis of the information theory and allowing us to obtain index terms having a probability of occurrence in the collection of documents as well balanced as possible. Finally, we treat the case of semantic index independent of the data (statically choosen), allowing a parameterisation of the level of generality of the index terms. Some of the criteria suggested for semantic indexing has been empirically evaluated. To judge their relevance, we used a well known vectorial system (the Smart IR system) and measured the performances of IR obtained with various reference collections. Those collections was indexed on the basis of the studied criterion, by taking into account the strongly structuring semantic relation of hyper/hyponymy ("is-a" relation), given by two different semantic resources. By comparing results obtained with the performances of a traditional indexing (using the lemmas of the words as representation space), we can show on one hand the relevance of the semantic indexings (in RD) and on the other hand the quality of the proposed criterion (MRC). Concerning man-machine interaction, we present a general outline allowing to build in a relatively fast and systematic way systems with mixed initiative, giving the human user a large (and natural) latitude in the control of the dialogue. This outline is usable in typical database research-task applications (where the database is hidden to the user, but the latter knows exactly which information they wish to find) as well as advice-task applications, for which the users does not necessarily have a precise idea of their needs, and uses the system not only for specifing their wishes, but also a set of propositions as a final result. We particularly stress the techniques allowing us to obtain a robust system, able to deal with speech recognizer failures. Concerning the visualisation of large textual data collections, we present an application of the correspondences analysis (allowing to highlight similarities and oppositions for various groups of entity, built on the basis of additional features present in the DB) to the case of patents data. In addition, we propose a method (based on the bootstrap replication principle) allowing us to determine a confidence interval for relative positionings of various groups, thus permit to immediately judge the reliability of the visually apparent similarities or oppositions.

EPFL2006

Graph-based image representation learning

Renata Khasanova

Though deep learning (DL) algorithms are very powerful for image processing tasks, they generally require a lot of data to reach their full potential. Furthermore, there is no straightforward way to impose various properties, given by the prior knowledge about the target task, on the features extracted by a DL model. Therefore, in this thesis we propose several techniques that rely on the power of graph representations to embed prior knowledge inside the learning process. This allows to reduce the solution space and leads to faster optimization convergence and higher accuracy in the representation learning. In our first work, inspired by the ability of a human to correctly classify rotated, shifted or flipped objects, we propose an algorithm that permits to inherently encode invariance to isometric transformations of objects in an image. Our DL architecture is based on graph representations and consists of three novel layers, which we refer to as graph convolutional, dynamic pooling and statistical layers. Our experiments on the image classification tasks show that our network correctly recognizes isometrically transformed objects even though such types of transformation are not seen by the network at training time. Standard DL techniques are typically not able to succeed in solving such a problem without extensive data augmentation. Then, we propose to exploit the properties of graph-based approaches to efficiently process images with various types of projective geometry. In particular, we are interested in increasingly popular omnidirectional cameras, which have a 360 degree field of view. Despite their effectiveness, such cameras create images with specific geometric properties, which require special techniques for efficient processing. We propose an efficient way of adjusting the weights of the graph edges to adapt the filter responses to the geometric image properties introduced by omnidirectional cameras. Our experiments prove that using the proposed graph with properly adjusted edge weights permits to reach better performance as compared to using regular grid graph with equal weights. Finally, the approach described above relies on the isotropic filters, which work well within our transformation invariant architecture for image classification. However, for other problems (e.g. image compression) or even when used without dynamic pooling and statistical layers that are defined within the proposed architecture, these filters are unable to efficiently encode the information about the object. Thus, we introduce a different technique based on anisotropic filters that adapt their shape and size according to the omnidirectional image geometry. The main advantage of this approach compared to the previous one is the ability to encode the orientation of an image pattern, which is important for various tasks such as image compression. Our experiments show that our approach adapts to different image projective geometries and achieves state-of-the-art performance on image classification and compression tasks. Overall we propose several methods, which combine the power of DL and graph signal processing towards incorporating prior information about the target task inside the optimization procedure. We hope that the research efforts presented in this thesis will help the development of efficient DL algorithms that can use various types of prior knowledge to make them efficient even when the available training data is scarce.