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Alignment and Assembly

Publications associées (201)

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Biomechanics of DNA structures visualized by 4D electron microscopy

Ulrich Lorenz

We present a technique for in situ visualization of the biomechanics of DNA structural networks using 4D electron microscopy. Vibrational oscillations of the DNA structure are excited mechanically through a short burst of substrate vibrations triggered by ...

2013

Function computation via subspace coding

Christina Fragouli, Lorenzo Keller, Nikhil Karamchandani

This paper considers function computation in a network where intermediate nodes perform randomized network coding, through appropriate choice of the subspace codebooks at the source nodes. Unlike traditional network coding for comput- ing functions, that r ...

2013

PREDIcT: Towards Predicting the Runtime of Large Scale Iterative Analytics

Anastasia Ailamaki, Adrian Daniel Popescu

Machine learning algorithms are widely used today for analytical tasks such as data cleaning, data categorization, or data filtering. At the same time, the rise of social media motivates recent uptake in large scale graph processing. Both categories of alg ...

2013

Towards Predicting the Runtime of Iterative Analytics with PREDIcT

Anastasia Ailamaki, Adrian Daniel Popescu

EPFL2013

Privacy and Dynamics of Social Networks (PhD Thesis: pre-print)

Pedram Pedarsani

Over the past decade, investigations in different fields have focused on studying and understanding real networks, ranging from biological to social to technological. These networks, called complex networks, exhibit common topological features, such as a h ...

2012

Diffusion Adaptation Over Networks Under Imperfect Information Exchange and Non-Stationary Data

Ali H. Sayed

Adaptive networks rely on in-network and collaborative processing among distributed agents to deliver enhanced performance in estimation and inference tasks. Information is exchanged among the nodes, usually over noisy links. The combination weights that a ...

IEEE2012

On the spatial partitioning of urban transportation networks

Nikolaos Geroliminis, Yuxuan Ji

It has been recently shown that a macroscopic fundamental diagram (MFD) linking space-mean network flow, density and speed exists in the urban transportation networks under some conditions. An MFD is further well defined if the network is homogeneous with ...

Elsevier2012

Properties of Network Polynomials

Christina Fragouli, Javad Ebrahimi Boroojeni

It is well known that transfer polynomials play an important role in the network code design problem. In this paper we provide a graph theoretical description of the terms of such polynomials. We consider acyclic networks with arbitrary number of receivers ...

2012

Properties of Network Polynomials

Javad Ebrahimi Boroojeni

Ieee2012

Untrusting network coding

Ghid Maatouk, Christina Fragouli, Vinod Malathidevi Prabhakaran, Yasin Buyukalp

In networks that perform linear network coding, an intermediate network node may receive a much larger number of linear equations of the source symbols than the number of messages it needs to send. For networks constructed by untrusted nodes, we propose a ...

2012