Degree distributionIn the study of graphs and networks, the degree of a node in a network is the number of connections it has to other nodes and the degree distribution is the probability distribution of these degrees over the whole network. The degree of a node in a network (sometimes referred to incorrectly as the connectivity) is the number of connections or edges the node has to other nodes. If a network is directed, meaning that edges point in one direction from one node to another node, then nodes have two different degrees, the in-degree, which is the number of incoming edges, and the out-degree, which is the number of outgoing edges.
Catalan numberIn combinatorial mathematics, the Catalan numbers are a sequence of natural numbers that occur in various counting problems, often involving recursively defined objects. They are named after the French-Belgian mathematician Eugène Charles Catalan. The nth Catalan number can be expressed directly in terms of the central binomial coefficients by The first Catalan numbers for n = 0, 1, 2, 3, ... are 1, 1, 2, 5, 14, 42, 132, 429, 1430, 4862, 16796, 58786, ... . An alternative expression for Cn is for which is equivalent to the expression given above because .
Stochastic matrixIn mathematics, a stochastic matrix is a square matrix used to describe the transitions of a Markov chain. Each of its entries is a nonnegative real number representing a probability. It is also called a probability matrix, transition matrix, substitution matrix, or Markov matrix. The stochastic matrix was first developed by Andrey Markov at the beginning of the 20th century, and has found use throughout a wide variety of scientific fields, including probability theory, statistics, mathematical finance and linear algebra, as well as computer science and population genetics.
Stiffness matrixIn the finite element method for the numerical solution of elliptic partial differential equations, the stiffness matrix is a matrix that represents the system of linear equations that must be solved in order to ascertain an approximate solution to the differential equation. For simplicity, we will first consider the Poisson problem on some domain Ω, subject to the boundary condition u = 0 on the boundary of Ω. To discretize this equation by the finite element method, one chooses a set of basis functions {φ_1, .
Biological networkA biological network is a method of representing systems as complex sets of binary interactions or relations between various biological entities. In general, networks or graphs are used to capture relationships between entities or objects. A typical graphing representation consists of a set of nodes connected by edges. As early as 1736 Leonhard Euler analyzed a real-world issue known as the Seven Bridges of Königsberg, which established the foundation of graph theory. From the 1930's-1950's the study of random graphs were developed.
Color-codingIn computer science and graph theory, the term color-coding refers to an algorithmic technique which is useful in the discovery of network motifs. For example, it can be used to detect a simple path of length k in a given graph. The traditional color-coding algorithm is probabilistic, but it can be derandomized without much overhead in the running time. Color-coding also applies to the detection of cycles of a given length, and more generally it applies to the subgraph isomorphism problem (an NP-complete problem), where it yields polynomial time algorithms when the subgraph pattern that it is trying to detect has bounded treewidth.
Scale-free networkA scale-free network is a network whose degree distribution follows a power law, at least asymptotically. That is, the fraction P(k) of nodes in the network having k connections to other nodes goes for large values of k as where is a parameter whose value is typically in the range (wherein the second moment (scale parameter) of is infinite but the first moment is finite), although occasionally it may lie outside these bounds. The name "scale-free" means that some moments of the degree distribution are not defined, so that the network does not have a characteristic scale or "size".
Falling and rising factorialsIn mathematics, the falling factorial (sometimes called the descending factorial, falling sequential product, or lower factorial) is defined as the polynomial The rising factorial (sometimes called the Pochhammer function, Pochhammer polynomial, ascending factorial, rising sequential product, or upper factorial) is defined as The value of each is taken to be 1 (an empty product) when These symbols are collectively called factorial powers. The Pochhammer symbol, introduced by Leo August Pochhammer, is the notation (x)_n , where n is a non-negative integer.
Floyd–Warshall algorithmIn computer science, the Floyd–Warshall algorithm (also known as Floyd's algorithm, the Roy–Warshall algorithm, the Roy–Floyd algorithm, or the WFI algorithm) is an algorithm for finding shortest paths in a directed weighted graph with positive or negative edge weights (but with no negative cycles). A single execution of the algorithm will find the lengths (summed weights) of shortest paths between all pairs of vertices. Although it does not return details of the paths themselves, it is possible to reconstruct the paths with simple modifications to the algorithm.
HypergraphIn mathematics, a hypergraph is a generalization of a graph in which an edge can join any number of vertices. In contrast, in an ordinary graph, an edge connects exactly two vertices. Formally, a directed hypergraph is a pair , where is a set of elements called nodes, vertices, points, or elements and is a set of pairs of subsets of . Each of these pairs is called an edge or hyperedge; the vertex subset is known as its tail or domain, and as its head or codomain. The order of a hypergraph is the number of vertices in .
