Viral envelope | EPFL Graph Search

A viral envelope is the outermost layer of many types of viruses. It protects the genetic material in their life cycle when traveling between host cells. Not all viruses have envelopes. A viral envelope protein or E protein is a protein in the envelope, which may be acquired by the capsid from an infected host cell. Numerous human pathogenic viruses in circulation are encased in lipid bilayers, and they infect their target cells by causing the viral envelope and cell membrane to fuse. Although there are effective vaccines against some of these viruses, there is no preventative or curative medicine for the majority of them. In most cases, the known vaccines operate by inducing antibodies that prevent the pathogen from entering cells. This happens in the case of enveloped viruses when the antibodies bind to the viral envelope proteins. The membrane fusion event that triggers viral entrance is caused by the viral fusion protein. Many enveloped viruses only have one protein visible on

Broad-spectrum Antiviral Nanoparticles

Marie Müller

Viral infections affect millions of people every year, yet broad-spectrum virucidal therapies are not available. Antiviral substances in current use act on specific viral mechanisms against only a small number of viruses. Virustatic materials interfere with the viral infection cycle before the cells become infected. By targeting highly conserved attachment receptors, they can be broad-spectrum and non-toxic. However, their reversible virus binding renders them ineffective in-vivo and therapeutically irrelevant. Broad-spectrum virucidal substances that irreversibly inhibit viral infectivity do exist, but are too toxic for therapeutic applications. An ideal antiviral method would be broad-spectrum, virucidal instead of virustatic and therefore irreversible, and non-toxic. The scientific literature describes gold-nanoparticles (NPs) with 2-mercaptoethanesulfonate (MES) ligands as virustatic since these NPs only bind reversibly to viral attachment ligands. In our research group, we postulated that by lengthening the ligands to 11-mercapto-1-undecanesulfonate (MUS), their binding would be stronger and induce a force on the viruses sufficient to damage the virus irreversibly. Virological testing indicated that these MUS NPs do exhibit a virucidal effect against a wide range of viruses. The present study was able to show the structural damage to viruses in their near-native state imaged in cryo-electron microscopy (cryoEM). We found that while virustatic MES NPs attach only in small numbers to the viruses virucidal MUS NPs avidly attach to viruses and show a clear progression towards fully NP-covered viruses, which we interpret as the morphology of the virucidal endpoint. The analysis of the immediate interaction of virucidal NPs and viruses showed that virucidal NPs bind to proteins vital to the viral infection cycle: (1) Virucidal NPs bind to glycoproteins on the viral envelope that exert a force onto the viral envelope leading to envelope breakage. (2) Virucidal NPs attach to released viral capsids that break upon interaction with virucidal NPs and become fully NP covered, which is the morphology of the virucidal endpoint. This project provided an opportunity to advance the field of NPs â based antivirals. It is the first study to provide a solution-state visualisation of the interaction of viruses and virucidal NPs. The study further offers important insight to the association of single NPs with viral proteins of the envelope and virus capsid as well as their effect upon them, and offers a new approach for the future of broad-spectrum non-toxic virucidal therapies. Keywords Nanoparticles, Viruses, CryoEM, CryoET, broad-spectrum antivirals, virustatic, virucidal, HSPG, HSV

EPFL2017

Single-molecule kinetics of pore assembly by the membrane attack complex

Georg Fantner, Adrian Pascal Nievergelt

The membrane attack complex (MAC) is a hetero-oligomeric protein assembly that kills pathogens by perforating their cell envelopes. The MAC is formed by sequential assembly of soluble complement proteins C5b, C6, C7, C8 and C9, but little is known about the rate-limiting steps in this process. Here, we use rapid atomic force microscopy (AFM) imaging to show that MAC proteins oligomerize within the membrane, unlike structurally homologous bacterial pore-forming toxins. C5b-7 interacts with the lipid bilayer prior to recruiting C8. We discover that incorporation of the first C9 is the kinetic bottleneck of MAC formation, after which rapid C9 oligomerization completes the pore. This defines the kinetic basis for MAC assembly and provides insight into how human cells are protected from bystander damage by the cell surface receptor CD59, which is offered a maximum temporal window to halt the assembly at the point of C9 insertion.

Springer2019

Broad-spectrum Antiviral Nanoparticles

Marie Müller

EPFL2017