Concept

Distance matrix

Related publications (36)

Impact of phylogeny on structural contact inference from protein sequence data

Anne-Florence Raphaëlle Bitbol, Nicola Dietler, Umberto Lupo

Local and global inference methods have been developed to infer structural contacts from multiple sequence alignments of homologous proteins. They rely on correlations in amino acid usage at contacting sites. Because homologous proteins share a common ance ...

ROYAL SOC2023

Annihilation Filter Approach For Estimating Graph Dynamics From Diffusion Processes

Pascal Frossard, Arun Venkitaraman

We propose an approach for estimating graph diffusion processes using annihilation filters from a finite set of observations of the diffusion process made at regular intervals. Our approach is based on the key observation that a graph diffusion process can ...

IEEE2022

Automatic Dysarthric Speech Detection Exploiting Pairwise Distance-Based Convolutional Neural Networks

Hervé Bourlard, Ina Kodrasi, Parvaneh Janbakhshi

Automatic dysarthric speech detection can provide reliable and cost-effective computer-aided tools to assist the clinical diagnosis and management of dysarthria. In this paper we propose a novel automatic dysarthric speech detection approach based on analy ...

IEEE2021

Representing graphs through data with learning and optimal transport

Hermina Petric Maretic

Graphs offer a simple yet meaningful representation of relationships between data. Thisrepresentation is often used in machine learning algorithms in order to incorporate structuralor geometric information about data. However, it can also be used in an inv ...

EPFL2021

Interpretable Social Anchors for Human Trajectory Forecasting in Crowds

Alexandre Massoud Alahi, Parth Ashit Kothari

Human trajectory forecasting in crowds, at its core, is a sequence prediction problem with specific challenges of capturing inter-sequence dependencies (social interactions) and consequently predicting socially-compliant multimodal distributions. In recent ...

2021

Rock Heterogeneity and Fractures

Judith Marie Colette Capron

Hydraulic fracturing has a wide range of applications. It is widely studied and modelled to better understand all the possible situations and foresee possible advantage in the industry. When it comes to modelling, the struggle of being able to simulate com ...

2021

AUTOMATIC DYSARTHRIC SPEECH DETECTION EXPLOITING PAIRWISE DISTANCE-BASED CONVOLUTIONAL NEURAL NETWORKS

Hervé Bourlard, Ina Kodrasi, Parvaneh Janbakhshi

Idiap2020

MPGM: Scalable and Accurate Multiple Network Alignment

Matthias Grossglauser, Ehsan Kazemi

Protein-protein interaction (PPI) network alignment is a canonical operation to transfer biological knowledge among species. The alignment of PPI-networks has many applications, such as the prediction of protein function, detection of conserved network mot ...

IEEE COMPUTER SOC2020

On Perfect Clustering of High Dimension, Low Sample Size Data

Soham Sarkar

Popular clustering algorithms based on usual distance functions (e.g., the Euclidean distance) often suffer in high dimension, low sample size (HDLSS) situations, where concentration of pairwise distances and violation of neighborhood structure have advers ...

IEEE COMPUTER SOC2020

Model-Class Selection Using Clustering and Classification for Structural Identification and Prediction

Ian Smith, Sai Ganesh Sarvotham Pai, Masoud Sanayei

Structural identification using physics-based models and subsequent prediction have much potential to enhance civil infrastructure asset-management decision-making. Interpreting monitoring information in the presence of multiple uncertainty sources and sys ...

2020

Graph Chatbot

Chat with Graph Search

Ask any question about EPFL courses, lectures, exercises, research, news, etc. or try the example questions below.

DISCLAIMER: The Graph Chatbot is not programmed to provide explicit or categorical answers to your questions. Rather, it transforms your questions into API requests that are distributed across the various IT services officially administered by EPFL. Its purpose is solely to collect and recommend relevant references to content that you can explore to help you answer your questions.