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Node-weighted network design and maximum sub-determinants

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On Computing Breakpoint Distances for Genomes with Duplicate Genes

Bernard Moret, Mingfu Shao

A fundamental problem in comparative genomics is to compute the distance between two genomes in terms of its higher level organization (given by genes or syntenic blocks). For two genomes without duplicate genes, we can easily define (and almost always eff ...

Mary Ann Liebert, Inc2017

LP-Based Algorithms For Capacitated Facility Location

Ola Nils Anders Svensson, Hyung Chan An

Linear programming (LP) has played a key role in the study of algorithms for combinatorial optimization problems. In the field of approximation algorithms, this is well illustrated by the uncapacitated facility location problem. A variety of algorithmic me ...

Society for Industrial and Applied Mathematics2017

Subdeterminant Maximization via Nonconvex Relaxations and Anti-Concentration

Nisheeth Vishnoi, Javad Ebrahimi Boroojeni, Damian Mateusz Straszak

Several fundamental problems that arise in optimization and computer science can be cast as follows: Given vectors v(1), ..., v(m) is an element of R-d and a constraint family B subset of 2([m]), find a set S. B that maximizes the squared volume of the sim ...

Ieee2017

Maximizing Symmetric Submodular Functions

Moran Feldman

Symmetric submodular functions are an important family of submodular functions capturing many interesting cases, including cut functions of graphs and hypergraphs. Maximization of such functions subject to various constraints receives little attention by c ...

Association for Computing Machinery2017

On chirality of toroidal embeddings of polyhedral graphs

Senja Dominique Barthel

We investigate properties of spatial graphs on the standard torus. It is known that nontrivial embeddings of planar graphs in the torus contain a nontrivial knot or a non-split link due to [2, 3]. Building on this and using the chirality of torus knots and ...

World Scientific Publishing2017

Independence number of generalized Petersen graphs

Javad Ebrahimi Boroojeni

Determining the size of a maximum independent set of a graph G, denoted by alpha(G), is an NP-hard problem. Therefore many attempts are made to find upper and lower bounds, or exact values of alpha(G) for special classes of graphs. This paper is aimed towa ...

Charles Babbage Res Ctr2016

Group-Sparse Model Selection: Hardness and Relaxations

Volkan Cevher, Anastasios Kyrillidis, Luca Baldassarre, Nirav Bhan

Group-based sparsity models are proven instrumental in linear regression problems for recovering signals from much fewer measurements than standard compressive sensing. The main promise of these models is the recovery of ``interpretable" signals along with ...

Institute of Electrical and Electronics Engineers2016

Quasi-Polynomial Local Search for Restricted Max-Min Fair Allocation

Ola Nils Anders Svensson, Lukas Polacek

The restricted max-min fair allocation problem (also known as the restricted Santa Claus problem) is one of few problems that enjoys the intriguing status of having a better estimation algorithm than approximation algorithm. Indeed, Asadpour et al. [2012] ...

Assoc Computing Machinery2016

Approximation algorithms for geometric dispersion

Alfonso Bolívar Cevallos Manzano

The most basic form of the max-sum dispersion problem (MSD) is as follows: given n points in R^q and an integer k, select a set of k points such that the sum of the pairwise distances within the set is maximal. This is a prominent diversity problem, with w ...

EPFL2016

An Efficient Streaming Algorithm for the Submodular Cover Problem

Volkan Cevher, Ilija Bogunovic, Ya-Ping Hsieh, Ashkan Norouzi Fard, Abbas Bazzi, Marwa El Halabi

We initiate the study of the classical Submodular Cover (SC) problem in the data streaming model which we refer to as the Streaming Submodular Cover (SSC). We show that any single pass streaming algorithm using sublinear memory in the size of the stream wi ...

2016