Publication

Biokinetic process model diagnosis with shape-constrained spline functions

Abstract

Model-structure identification is important for the optimization and design of biokinetic processes. Standard Monod and Tessier functions are often used by default to describe bacterial growth with respect to a substrate, leading to significant optimization errors in case of inappropriate representation. This paper introduces shape-constrained spline (SCS) functions, which share the qualitative behavior of a number of conventional growth-rate functions expressing substrate affinity effects. A simulated case study demonstrates the capabilities in terms of model identification of SCS functions, which offer a high parametric flexibility and could replace incomplete libraries of functions by a single biokinetic model structure. Moreover, the diagnostic ability of the spline functions is illustrated for the case of Haldane kinetics, which exhibits a distinctively different shape. The major benefit of these spline functions lies in their model discrimination capabilities by indicating in a quick and conclusive way the presence of other effects than substrate affinity.

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In mathematics, a spline is a special function defined piecewise by polynomials. In interpolating problems, spline interpolation is often preferred to polynomial interpolation because it yields similar results, even when using low degree polynomials, while avoiding Runge's phenomenon for higher degrees. In the computer science subfields of computer-aided design and computer graphics, the term spline more frequently refers to a piecewise polynomial (parametric) curve.
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